Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2297 ATGGATGCAAATCTCATACACCGATTGGAATCGGCGGTTACGCGTTTAGAGGCGATATCATCCACCGGATTCCATCCCGCCACCACTTCACCGTCCGACGGTTCCGATGCGGCACACGATCCATCAGTTGTTGCATACGGCGATCTGATTGATCAATTTGTCGGTAGGGTTTCCACTGCTGCCGAGATTATTGGTGGACAGGTGTTGGAGGTTACTAATAGGGTGAAGGAAGCTTTTGCTGTTCAGAAAGAGCTTTTGATTAAGCTTAAAACCACTCAGAAACCTGACCCTGCTGGGATTTCTGAATTTCTGAAACCATTGAATGAAGTGATCACGAAAGCTGCTGCTTTGACAGAAGGAAGGAGATCTGATTTTTTTAATCACTTGAAAGCTGCTGTTGACAGTCTTTCTGCTCTAGCATGGATTGCATTTACTGGGAAGGGTTGTGGTATGAGTATGCCCGTTGCACATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTATAGCAACAAGGTACTTGTAGAGTACAGAAACAAAGACCCAAATCATGTTGAGTGGGTCAAAGCTCTCAAAGAGTTGTATGTACCTGGATTGAGGGATTATGTTAAGAGCTTTCATGCATTAGGCCCTGTATGGAGTCAAACAGGAAAAGTGATTGCTCCATCAAAAGCTAATGCTTCTGTTGCACCTTCTGCCCCTCCTCCCCCGCCTGCATCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCAAAAGTGGGGATGTCTGCTGTTTTTCAAGAGATTGGTACAAGAGATGTCACAGCAGGCCTGAGAAAGGTTACGGATGATATGAAGACTAAGAATCGCACAGATAGATCTGGAGTTGTTGGCAGTAGTGTAAAAGAAAGTCAAGCTAGTGCACGTGCAGTTCCTAAAGTAGGACCTCCGAAGTTAGAACTTCAAATGGGCCGCAAGTGGGTTGTTGAGAATCAAATTGAGCAGAAAAGCTTGATCATTGAAGATTGTGATTCAAAGCAGTCTGTATATGTTTATGGATGTAAAAACTCTGTGTTGCAGATTCAAGGCAAGGTCAACAATATAACTATTGACAATTGCAAAAAGACGGGAGTTGTATTTAAGGATGTTGTTGCAGCTTTTGAGATTGTAAACAGTAATGGGGTTGAGGTTCAATGCCAGGGCTCGGCTCCTACAATTTCGGTGGACAACACTTCTGGCTGCCAGATATATCTGAGCAAAGACTCTTTAGAAACTTCCATATCTACAGCAAAGTCAAGTGAGATCAATGTATTAGTTCCTAACGCTGAGTCTGACGGTGATTGGGTGGAGCATTCTTTACCGCAACAGTACATTCATATATTCAAGGAAGGCCGATTTGAAACAACTCCAGCTTCTCACTCTGGAGGTTAA 1416 0.4357 MDANLIHRLESAVTRLEAISSTGFHPATTSPSDGSDAAHDPSVVAYGDLIDQFVGRVSTAAEIIGGQVLEVTNRVKEAFAVQKELLIKLKTTQKPDPAGISEFLKPLNEVITKAAALTEGRRSDFFNHLKAAVDSLSALAWIAFTGKGCGMSMPVAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWVKALKELYVPGLRDYVKSFHALGPVWSQTGKVIAPSKANASVAPSAPPPPPASLFSSESSQASSSKPKVGMSAVFQEIGTRDVTAGLRKVTDDMKTKNRTDRSGVVGSSVKESQASARAVPKVGPPKLELQMGRKWVVENQIEQKSLIIEDCDSKQSVYVYGCKNSVLQIQGKVNNITIDNCKKTGVVFKDVVAAFEIVNSNGVEVQCQGSAPTISVDNTSGCQIYLSKDSLETSISTAKSSEINVLVPNAESDGDWVEHSLPQQYIHIFKEGRFETTPASHSGG* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2297 471 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 311 470 IPR036223 -
Tpr3g2297 471 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 471 - -
Tpr3g2297 471 MobiDBLite consensus disorder prediction 227 253 - -
Tpr3g2297 471 Gene3D - 42 217 IPR036222 -
Tpr3g2297 471 Gene3D - 310 470 IPR016098 -
Tpr3g2297 471 Pfam Adenylate cyclase associated (CAP) C terminal 311 468 IPR013912 GO:0003779|GO:0007010
Tpr3g2297 471 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 42 237 IPR036222 -
Tpr3g2297 471 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Tpr3g2297 471 ProSiteProfiles C-CAP/cofactor C-like domain profile. 311 448 IPR017901 -
Tpr3g2297 471 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 471 IPR001837 GO:0003779|GO:0007010
Tpr3g2297 471 SMART carp 387 424 IPR006599 -
Tpr3g2297 471 SMART carp 349 386 IPR006599 -
Tpr3g2297 471 MobiDBLite consensus disorder prediction 276 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2297 Tpr-Chr3 21734769 21739141 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2297 K17261 - gmx:100793194 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2297 3 21734769 21739141 Tpr3g2297 3 21734769 21739141 ECH