Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2294 ATGGCTACAACTTCCAACCTTTCATTCCTTCTTTACCTTACCCTCATCACCACTACCCTCTACTTTGCTGATTCGCAATCTTTCATCGGAGTAAACTACGGTCAAGTCGCCGACAACCTTCCACCGCCGGACGCCACGGCCAACCTACTAAAATCCACCTCTATCGGAAAAGTCCGTCTTTATGGTGCCGATCCAGCGATCATCAAAGCTTTAGCAAATTCCGGCATCGGAATAACCATCGGAGCTGCCAACGGTGACATTCCGAGTTTAGCATCAAATCCAAACTCAGCGACTCAGTGGGTTAACTCAAACGTGTTACCATACTATCCTGCAAGCAACATAACTCTGATCACCGTCGGTAACGAAGTTATGACATCCGGCGACAATGGTCTCATATCACAGCTAGTTCCGGCGATTCAAAATGTCCAAAATGCCCTCAACTCGGTCTCACTCGGTGGCAAGATCAAAGTATCCTCAGTTCATTCTATGGCCGTGTTGACTCAGTCGGATCCTCCATCTTCCGGGTCTTTTGACCCGAATCTTAAGAACACATTGAAAGAGTTGCTTGAGTTTCAGAAAGAGAACAAAGCTCCATTCACTATTAACCCGTACCCGTTTTTCGCTTACCAGAGTGACACAAGATCCGAAACCCTTGCATTCTGTTTGTTTCAACCGAATTCGGGTCGGGTTGATTCGGGTAATGGTAAACTTTACACAAACATGTTCGATGCTCAGGTTGATGCAGTACATTCAGCTTTAAGTGGAATGGGATTCGAAGACATAGAAATTGTGGTAGCTGAGACAGGATGGCCTACACGTGGGGACAACAATGAAGTAGGAACAAGTGTTGAAAATGCCAAATCCTATAATGGAAATCTTATTACACATCTTAGATCATTGGTTGGTACACCTTTGATGCCTGGAAAATCTATTGACACATACCTTTTTGCTCTCTATGATGAAGATTTAAAACCTGGTCCTGGATCTGAACGTGCTTTTGGTCTTTATAAAACTGATCTTAGTGTTGCATATGATGTTGGCTTAGACAAGTCTTCCCAAAAGACTCCTCCATCAACCAATCCAAAGGCTCCTATTACTCCATCACCTAAAACAACAACTCAATGGTGCATTCCAAAATTAGGAATCTCTGATGATGAACTGCAGGTAAATCTTGACTATGTTTGTAGTAGACAAGGCATAGATTGTGGACCAATTCAACCAGGAGCTGCTTGTTATGATCCAAATACAGTAGCATCTCATGCTGCTTTTGCAATGAATCTTTATTACCAAAAGTTTGGTAGAAATCCTTGGAATTGTGATTTCTCTCAAACTGCAACTCTTACATCTCAAAATCCAAGTTACAATGCGTGCGTTTATCCAAGTGGAAGTACATGA 1395 0.428 MATTSNLSFLLYLTLITTTLYFADSQSFIGVNYGQVADNLPPPDATANLLKSTSIGKVRLYGADPAIIKALANSGIGITIGAANGDIPSLASNPNSATQWVNSNVLPYYPASNITLITVGNEVMTSGDNGLISQLVPAIQNVQNALNSVSLGGKIKVSSVHSMAVLTQSDPPSSGSFDPNLKNTLKELLEFQKENKAPFTINPYPFFAYQSDTRSETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSGMGFEDIEIVVAETGWPTRGDNNEVGTSVENAKSYNGNLITHLRSLVGTPLMPGKSIDTYLFALYDEDLKPGPGSERAFGLYKTDLSVAYDVGLDKSSQKTPPSTNPKAPITPSPKTTTQWCIPKLGISDDELQVNLDYVCSRQGIDCGPIQPGAACYDPNTVASHAAFAMNLYYQKFGRNPWNCDFSQTATLTSQNPSYNACVYPSGST* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2294 464 MobiDBLite consensus disorder prediction 350 370 - -
Tpr3g2294 464 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Tpr3g2294 464 SMART X8_cls 374 459 IPR012946 -
Tpr3g2294 464 Gene3D - 370 460 - -
Tpr3g2294 464 Pfam X8 domain 374 446 IPR012946 -
Tpr3g2294 464 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 8 456 - -
Tpr3g2294 464 Pfam Glycosyl hydrolases family 17 29 346 IPR000490 GO:0004553|GO:0005975
Tpr3g2294 464 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 456 IPR044965 GO:0004553|GO:0005975
Tpr3g2294 464 Gene3D Glycosidases 28 355 - -
Tpr3g2294 464 MobiDBLite consensus disorder prediction 351 370 - -
Tpr3g2294 464 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2294 Tpr-Chr3 21644741 21650619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2294 23 460 Miscellaneous Gene Families AT2G16230 64.840 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2294 - - gmx:100778892 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2294 3 21644741 21650619 Tpr3g2294 3 21644741 21650619 ECH