Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2285 ATGGTATCTCAAGCTCTATCAGTTCCTGCAATTCCTACTTTCACTATCGCCTCTCACCGCAGAATCCCTTCCCAACTCGCGTTTTCTCACAGAAACTCCTGCACGATATCTTCTTCCTTGCCAAGCCCCTATGGCCACTCATCTAAAATGGGGTTATCAAGTAAAACCAGTGATTTTCGTTTAAAACTCGATGAGAAAACTACACATGATGTTAGTACTACAAGTTATGGTGCAATTGAAGCCAGTGGGAACCCGCCAGTATCACCAGCCATCATGACTCCGGGAGGAGCTCTTGATCTCTCATCTGTTTTGTTCAGGAATCGTATAATATTCGTAGGACAGCCAATTAATGGACAAGTGGCTCAGAGAGTTATTTCGCAGCTTTTGACTCTGGCTACTATTGATGAAGAATCAGATATACTGATGTATATCAATTGCCCTGGTGGAAGCACTTATTCAGTGCTTGCAATTTATGATTGCATGTCTTGGATAAAGCCAAAGGTTGGTACAGTAGTTTTCGGAGTAGCTGCAAGCCAAGGAACACTTCTCCTTGCAGGTGGGGAGAAGGGAATGCGCTATGCAATGCCAAATGCACGCATTGTGATGAATCAACCACGGTGTGGATTTGGGGGTCATGTTGAGGATGTGCAACGTCTAGTGAATGAAGCTGTTCAATCCCGCTATAAAATGGAGAAGATGTTTAGTGCATTCACCGGACAGCCATTGGAGAAGGTGCAAGAGTTCACAGATAGGGACAACTTTCTATCTGTTTCTGAGGCTTTGGACTTTGGTCTTATTGATGGTGTCTTGGAAACACGGTATTGA 825 0.4412 MVSQALSVPAIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFVGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARIVMNQPRCGFGGHVEDVQRLVNEAVQSRYKMEKMFSAFTGQPLEKVQEFTDRDNFLSVSEALDFGLIDGVLETRY* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2285 274 CDD S14_ClpP_2 99 269 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr3g2285 274 Hamap ATP-dependent Clp protease proteolytic subunit [clpP]. 83 273 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr3g2285 274 SUPERFAMILY ClpP/crotonase 98 272 IPR029045 -
Tpr3g2285 274 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC 14 274 - -
Tpr3g2285 274 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 14 274 IPR023562 -
Tpr3g2285 274 Pfam Clp protease 98 272 IPR023562 -
Tpr3g2285 274 Gene3D - 84 274 - -
Tpr3g2285 274 PRINTS Clp protease catalytic subunit P signature 99 114 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr3g2285 274 PRINTS Clp protease catalytic subunit P signature 139 159 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr3g2285 274 PRINTS Clp protease catalytic subunit P signature 170 187 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr3g2285 274 PRINTS Clp protease catalytic subunit P signature 191 210 IPR001907 GO:0004176|GO:0004252|GO:0006508
Tpr3g2285 274 PRINTS Clp protease catalytic subunit P signature 248 267 IPR001907 GO:0004176|GO:0004252|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2285 K01358 - gmx:100799710 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2285 3 21485190 21489323 Tpr3g2285 3 21485190 21489323 ECH