Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2283 ATGAGTGAGGGTAAGGTAGTTGAAGCAAAAGCTCAAAATTCACTTCATGATTTTGATCCTCAAAAGAAGCCCAAAAGAAACAAGTATGCTTTTGCTTGTGCTATTTTAGCTTCCATGACTTCCATTTTGCTTGGCTATGATATTGGAGTTATGAGTGGAGCAGCAATCTACATAAAAAGAGATCTTAGAGTGTCGGATGTACAAATTGAGGTTCTCTTAGGAATCATCAACATCTACTCTCTCATTGGTTCATGTCTAGCTGGAAGAACCTCTGATTGGATTGGTCGTCGTTACACCATTGTTCTTGCCGGTGCCATCTTTTTTGTTGGAGCCTTACTCATGGGTTTCTCACCAAACTACGCATTTCTCATGTTTGGCCGCTTCGTTGCTGGCGTTGGCATCGGCTATGCCCTCATGATTGCCCCTGTTTACACTGCTGAAGTCTCTCCCGCTTCCTCTCGTGGCTTCCTTACTTCTTTTCCCGAGGTTTTTATAAACGGTGGAATATTACTTGGATACATATCAAACTATGCATTTTCCAAACTATCACTTAAACTAGGTTGGAGAATGATGCTTGGAATCGGCGCAATTCCATCGGTAATCCTAGCCGTTGGAGTTTTAGCCATGCCAGAGTCACCACGTTGGCTTGTAATGAAAGGTCGTTTAGGAGATGCCACAAAAGTACTCAACAAAACATCAGATTCCAAAGAAGAAGCTCAACTAAGATTAGCCGAAATAAAACAAGCCGCTGGAATACCTGAAGAATGTACAGACGACGTCGTTGAGGTCAAAATTAAAAACACGGGTGAAGGTGTATGGAAAGAGCTTTTCCTTTATCCTACACCCACAGTTCGTCATATTGTAATCGCAGCATTAGGAATTCACTTTTTTCAACAAGCTTCTGGTATAGACGCCGTCGTTCTATATAGTCCTACAATCTTCAAAAAAGCTGGAATCAACGGTGATACACATCTTCTACTTGCAACTATAGCCGTTGGATTTGTTAAAACAATGTTTATTTTGGTTGCTACTTTTATGTTGGATCGTTATGGTCGTCGTCCGTTGTTACTCACTAGTGTTGGTGGTATGGTAGTCTCGCTTCTCACGCTCGCTACCAGCCTTACGATTATTGATCATTCGCCAACAAAGCTAAATTGGGCCGTTGGATTGAGTATAGCAACTGTTTTGTCTTATGTGGCAACTTTTTCAATTGGTGCTGGACCTATCACATGGGTTTATAGTAGTGAAATTTTTCCTTTGAGGTTAAGAGCACAAGGTTGTGCTATGGGAGTTGTGGTGAATAGGCTCACAAGTGGGGTTATTTCAATGACGTTTTTGTCCTTAGCTAAGGCAATTACAATTGGTGGAGGTTTTTACCTCTTTGGAGGTATTGCTTTAATTGCTTGGATATTTTTTTATATTATGCTTCCTGAAACACAAGGGAAAACACTTGAAGAAATGGAAGCATCTTTTGGTAAAATTTGGAGAAAATCAAAGAATGATAAGGAAGTTCAGAATGATAAGGACCAAGTTGCACAAGTCCAGTTAGGAACCAATGTCTCAACTTAG 1569 0.406 MSEGKVVEAKAQNSLHDFDPQKKPKRNKYAFACAILASMTSILLGYDIGVMSGAAIYIKRDLRVSDVQIEVLLGIINIYSLIGSCLAGRTSDWIGRRYTIVLAGAIFFVGALLMGFSPNYAFLMFGRFVAGVGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKLSLKLGWRMMLGIGAIPSVILAVGVLAMPESPRWLVMKGRLGDATKVLNKTSDSKEEAQLRLAEIKQAAGIPEECTDDVVEVKIKNTGEGVWKELFLYPTPTVRHIVIAALGIHFFQQASGIDAVVLYSPTIFKKAGINGDTHLLLATIAVGFVKTMFILVATFMLDRYGRRPLLLTSVGGMVVSLLTLATSLTIIDHSPTKLNWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGCAMGVVVNRLTSGVISMTFLSLAKAITIGGGFYLFGGIALIAWIFFYIMLPETQGKTLEEMEASFGKIWRKSKNDKEVQNDKDQVAQVQLGTNVST* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2283 522 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr3g2283 522 PANTHER SUGAR TRANSPORTER 16 510 - -
Tpr3g2283 522 TIGRFAM SP: MFS transporter, sugar porter (SP) family 21 487 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2283 522 CDD MFS_PLT 36 487 IPR044776 GO:0005351
Tpr3g2283 522 ProSitePatterns Sugar transport proteins signature 1. 87 104 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr3g2283 522 SUPERFAMILY MFS general substrate transporter 19 488 IPR036259 -
Tpr3g2283 522 Gene3D MFS general substrate transporter like domains 23 494 IPR036259 -
Tpr3g2283 522 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 16 510 IPR045262 GO:0015144
Tpr3g2283 522 PRINTS Sugar transporter signature 41 51 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2283 522 PRINTS Sugar transporter signature 124 143 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2283 522 PRINTS Sugar transporter signature 298 308 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2283 522 PRINTS Sugar transporter signature 392 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2283 522 PRINTS Sugar transporter signature 415 427 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2283 522 Coils Coil 229 249 - -
Tpr3g2283 522 Pfam Sugar (and other) transporter 33 491 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr3g2283 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 33 480 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2283 Tpr-Chr3 21461300 21464088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2283 20 519 Organic Solute Cotransporters AT3G18830 73.956 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2283 - - lja:Lj3g3v3338420.1 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2283 3 21461300 21464088 Tpr3g2283 3 21461300 21464088 ECH