Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2281 ATGATTGGGCGCAGAGAAAGAGAAGGACCCTTGATGAGAAACAACTCTCATTCTCTACGCAAATCAAGGATCGTTACCGCTGTAGTAATTGGTGTTCTTATTGGATGCATCTTAGCTTTCTTTTTTCCTAATGGTTTCTTTGTTCCTTCCGCAAATCGTCATCTCCCTGTTGCTCGATCCAAAACCCAGGAAAAATCAGCTGAATGTGAATCCTCTGATAGGGTCAACATGTTAAAATCGGAGTTTGTGGCAGTATCAGATAAAAATGCTGAACTGAAAAAACAGGTGAGGGAGTTGACCGAAAGGCTTCGGCTAGCAGAGCAAGGGAAAGACCAGGCTCAAAAACAGTTTCTTGCATTGGGTAAACAAGAAAAAGCTGGACCTTTTGGTACTGTCAAGGGATTAAGAATCAATCCTACTGTTGTTCCTGATGATTCCGTGAACCCTAGATTGGCTAAGATATTAGAGAAAGTCGCAGTTAAAAGAGAGATCATAGTTGCACTTGCAAACTCCAATGTGAAGGAAATGCTTGAGGTCTGGTTCACCAATATCAAGAGAGTTGGTATATCCAATTATCTAGTTGTTGCTTTAGACGAAGAGATTTCCAAGTTCTGTGAATCAAATCAAGTCCCATTTTACAAAAGAGACCCGGATGATGGTATTGATACTATTGGAAAACAAGGAGGGAACCATGCTGTCTCTGGGCTTAAATTTCGTATTCTAAGAGAATTTTTGCAGTTGGGATACAGTGTTCTTCTATCAGACGTTGACATTGTATATTTGCAGAATCCTTTTGATCATCTATACCGTGACTCAGATGTCGAGTCCATGAGCGATGGTCATAATAACATGACAGCTTATGGCTATAACGATGTGTTCGACGAACCTGCAATGGGTTGGGCTCGATACGCTCATACCATGAGGATATGGGTTTACAACTCCGGTTTCTTCTATATCAGACCAACCATTCCTTCAATTGAGCTTTTAGATCGTGTCGCAACACGACTTTCCAAGGAAAATGCATGGGACCAAGCTGTTTTCAACGAGGAACTCTTTTATCCGTCGCATCCTGGTTATGATGGGCTTCATGCCGCTAGAAGAACTATGGATATCTATCTCTTTATGAACAGCAAGATTCTTTTCAAGACAGTTAGGAATGATGCTAACCTCAGCAAATTGAAACCGGTCATTATTCACGTGAATTACCATCCTGATAAGCTTCCAAGAATGAAAGCGATTGTTGAATATTATGTTAACGGGAAGCAGGATGCTCTCAAACCTTTTCCTGATGGCTCAGATTGGTAA 1305 0.4107 MIGRREREGPLMRNNSHSLRKSRIVTAVVIGVLIGCILAFFFPNGFFVPSANRHLPVARSKTQEKSAECESSDRVNMLKSEFVAVSDKNAELKKQVRELTERLRLAEQGKDQAQKQFLALGKQEKAGPFGTVKGLRINPTVVPDDSVNPRLAKILEKVAVKREIIVALANSNVKEMLEVWFTNIKRVGISNYLVVALDEEISKFCESNQVPFYKRDPDDGIDTIGKQGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNMTAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKENAWDQAVFNEELFYPSHPGYDGLHAARRTMDIYLFMNSKILFKTVRNDANLSKLKPVIIHVNYHPDKLPRMKAIVEYYVNGKQDALKPFPDGSDW* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2281 434 Pfam Nucleotide-diphospho-sugar transferase 189 407 IPR005069 -
Tpr3g2281 434 SUPERFAMILY Nucleotide-diphospho-sugar transferases 165 364 IPR029044 -
Tpr3g2281 434 PANTHER GLYCOSYLTRANSFERASE 2 433 - -
Tpr3g2281 434 PANTHER ARABINOSYLTRANSFERASE RRA3 2 433 IPR044290 GO:0016757|GO:0080147
Tpr3g2281 434 Coils Coil 82 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2281 Tpr-Chr3 21437515 21440507 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2281 K20783 - gmx:100804189 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2281 3 21437515 21440507 Tpr3g2281 3 21437515 21440507 ECH