Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2280 ATGGGAAAAGGAAGTGGTTGCATACCAAGCAAGAAAAAAGTACCAATCAATGATCCAGAAGAGAATGAACCTCTTAGTGTTGAAAGCCAAATTATTCCACAAAATGAAACAACAAGTAGAGACATAGATGTAGCAACAACATCATCAGAAGTGAAAAAATTAAAAGTTTACATTGTTTTTTACTCAATGTATGGTCATGTTGAATCATTAGCAAGATCATTGAAAAAAGGGGTTGACTCTGTTGATGGTGTTGAAGGAGTTTTGTACCGTGTCGTCGAGACTTTGTCTAAGGAAGTGTTGGAATTGATGAAAGCACCTGAGAAGGTTGATGATGGGATTCCTTTGATATCTGCTGAGAATTTGGTTGAGGCTGATGGGCTGTTGTTCGGTTTTCCGACTAGGTTTGGGAGTATGGCGGCGCAGATGAAGGGGCTTTTTGATTCGACAGGGCAGTTGTGGAAGGAACAGAAGCTTGCTGGTGTTCCTGCTGGTTTCTTTGTTAGTACTGGTACTCAAGGTGGTGGCCAAGAAACTACAGCGTGGACAGCAATAACACAATTAGTTCATCATGGAATGTTATATGTTCCAATTGGATATACTTTTGGTGCTGGAATGTTTGAAATGGATTCAATTAGAGGTGGATCTCCATATGGTGCTGGAGTTTATGCTGGAGATGGATCAAGACAAGCAACTGATGCTGAGTTGGCACTTGCTGAGTATCAAGGTAGATACATGGCTAATATAGTCAAGAAGTTAGGCCAAAAAAGCTAG 771 0.406 MGKGSGCIPSKKKVPINDPEENEPLSVESQIIPQNETTSRDIDVATTSSEVKKLKVYIVFYSMYGHVESLARSLKKGVDSVDGVEGVLYRVVETLSKEVLELMKAPEKVDDGIPLISAENLVEADGLLFGFPTRFGSMAAQMKGLFDSTGQLWKEQKLAGVPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLYVPIGYTFGAGMFEMDSIRGGSPYGAGVYAGDGSRQATDAELALAEYQGRYMANIVKKLGQKS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2280 256 ProSiteProfiles Flavodoxin-like domain profile. 56 245 IPR008254 GO:0010181
Tpr3g2280 256 MobiDBLite consensus disorder prediction 1 26 - -
Tpr3g2280 256 SUPERFAMILY Flavoproteins 55 252 IPR029039 -
Tpr3g2280 256 Pfam NADPH-dependent FMN reductase 118 197 IPR005025 GO:0016491
Tpr3g2280 256 PANTHER NAD(P)H:QUINONE OXIDOREDUCTASE, TYPE IV PROTEIN 4 256 - -
Tpr3g2280 256 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 55 252 IPR010089 GO:0003955|GO:0010181
Tpr3g2280 256 Gene3D - 52 253 IPR029039 -
Tpr3g2280 256 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 4 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2280 Tpr-Chr3 21423404 21425841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2280 K03809 - gmx:100803804 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2280 3 21423404 21425841 Tpr3g2280 3 21423404 21425841 ECH