Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2268 ATGCCAATGGATGTTTTCTCTGTCACCTCAACTACCATTCCCTCCTCTCTCATACGCAAAGATGCTGCAGCAGCAGATAAACCTTCTGGCCTTCTCAAGCTTTCCAAATACTCACATTTCATGAGGTACCCTTTAGCTACAATACCCTGCAAGAACAGAATCCGTAGCAATAGCATAAGAGCTCAAGCTTCTTCAGGTTCAACAAAATCTAGTACTGCTGAGGGGATTCCTGAGAAAAAAGATTCCAAGGATGATAATTTAGTATTTGTTGCTGGTGCTACTGGAAAAGTTGGTTCAAGAACAGTCAGGGAGCTTATAAAGCTTGGTTTTAGAGTCAGAGCTGGAGTCAGGAATGCTCAGAGAGCTAGTACATTGGTTCAGAGTGTTAAACAATTGAAGCTTGATGGTACAAGTGGAGGAAGTGAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAGCCAAATCAAATTGGACCAGCATTAGGGAATGCATCAACTGTGGTATGTACCATTGGCGCTAGTGAGAAGGAAGTTTTCGACGTTACTGGACCTTTTCGGATAGATTACCAGGCCACCAAAAACCTAGTTGATGCTGCAACTGTTGCCAAAGTTAATCACTTCATATTGGTTACTTCATTGGGAACAAACAAATTTGGTTTTCCTGCAGCTATTCTCAATTTATTTTGGGGAGTCTTGTGTTGGAAAAGGAAGGCAGAAGAAGCATTGCTAGCAAGTGGAATTCCATACACAATAGTGAGACCCGGAGGCATGGAGCGGCCTACCGATGCTTACAGGGAAACTCATAATGTAACCCTATCAACTGAAGATACTTTATTTGGGGGTCAGGTGTCAAACCTTCAGGTTGCTGAACTCATGGCAGTCATGGCCAAGAATCGTGATCTTTCGTACTGTAAAATAGTGGAGGTCGTTGCCGAGACAACTGCGCCACTGACACCTGCTGAAAAACTTCTTGCAAAAATACCTTCTCAACGCCCTTACATTTATCCGCCTAAGAAAGAACCAGAACAACCGAAACCAGATACTACAGCTGTTAGTGATCCAAGTCCCTCGGCTGATGTCGTGGCAGAAGTACCTATCATTTCTCCCCAGAAAGAAACAGAACAACAGAAACCAGTGGCAAATCAGCCACTTTCTCCTTATACTGCTTATGCTGATTTAAAGCCACCATCATCTCCTTCTCCATCTAAGCCTAGTGACAAGAAACAGATAAAGATCGGTGATGCAGTTCCAGCGCCTAGTTCTTCAGATACTCCAAGTAGCATTCCAGCAATAGATGGAATTTCTCAGACAATATCTTCCACAAAAGGAAAGGATGTTCTTTCTCCGTATGCAGCCTATGAAGATTTGAAACCTCCCACTTCTCCAACTCCAAGACAAAGTAGTTCCAAGGACAAACCTCTTACTGCGTCGACAGTCGTGGAACCTGTGTCACCATCTACAGAGGACAATGTTGCCGAAAAGAGTCCTTCTCAGGATTCAAATCCTAGTAATTCTCCTTATTATGTATATGCTGATTTCAAGCCTCCTAGTTCACCATCTCCTAGTAAACCAATTACATCTTCTGGGGGTGAGGTGCCGAAGATAGATGCAGTATCAAGCAACGGACCAGCTCAACTTTCTGTGGAAGATAAACCTAACGATGATGGACAGCAGCTCAGTGAACCAAAGACAAGACCCCTTTCACCTTATGCAATGTATGAGGACTTGAAGCCTCCTGCATCGCCATCACCTTCCTTCAGAAAATCTTAG 1779 0.4351 MPMDVFSVTSTTIPSSLIRKDAAAADKPSGLLKLSKYSHFMRYPLATIPCKNRIRSNSIRAQASSGSTKSSTAEGIPEKKDSKDDNLVFVAGATGKVGSRTVRELIKLGFRVRAGVRNAQRASTLVQSVKQLKLDGTSGGSEAVEKLEIVECDLEKPNQIGPALGNASTVVCTIGASEKEVFDVTGPFRIDYQATKNLVDAATVAKVNHFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDAYRETHNVTLSTEDTLFGGQVSNLQVAELMAVMAKNRDLSYCKIVEVVAETTAPLTPAEKLLAKIPSQRPYIYPPKKEPEQPKPDTTAVSDPSPSADVVAEVPIISPQKETEQQKPVANQPLSPYTAYADLKPPSSPSPSKPSDKKQIKIGDAVPAPSSSDTPSSIPAIDGISQTISSTKGKDVLSPYAAYEDLKPPTSPTPRQSSSKDKPLTASTVVEPVSPSTEDNVAEKSPSQDSNPSNSPYYVYADFKPPSSPSPSKPITSSGGEVPKIDAVSSNGPAQLSVEDKPNDDGQQLSEPKTRPLSPYAMYEDLKPPASPSPSFRKS* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2268 592 Pfam NAD(P)H-binding 92 301 IPR016040 -
Tpr3g2268 592 CDD SDR_a5 88 316 - -
Tpr3g2268 592 MobiDBLite consensus disorder prediction 543 567 - -
Tpr3g2268 592 MobiDBLite consensus disorder prediction 335 361 - -
Tpr3g2268 592 MobiDBLite consensus disorder prediction 57 73 - -
Tpr3g2268 592 Gene3D - 84 333 - -
Tpr3g2268 592 MobiDBLite consensus disorder prediction 463 510 - -
Tpr3g2268 592 MobiDBLite consensus disorder prediction 422 447 - -
Tpr3g2268 592 MobiDBLite consensus disorder prediction 396 592 - -
Tpr3g2268 592 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 313 IPR036291 -
Tpr3g2268 592 MobiDBLite consensus disorder prediction 57 79 - -
Tpr3g2268 592 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 6 591 IPR044719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2268 Tpr-Chr3 21322446 21326771 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2268 - - mtr:MTR_4g068970 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2268 3 21322446 21326771 Tpr3g2268 3 21322446 21326771 ECH