Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2260 ATGCATGATATAATGTCTCACCAATATGGTCTCAAGCAATGCATGTTAATCATGGACCAACCAGTTTCAGTTTCAAGTCACAAGCGCTCCAACAGTGATCCAATGAAATGGAGAGTAATGGAAGATGAATTTGTGAATATCAGAGAATCTTCTTATCAGCCTAAAGTGGAACTGGGATATCAAAAGCAAAATATTGAATCCAAGAAGAGGCAGTACAACAACATGGATCTTCAAAGTTCTTTGACTCAAGAGGCTGCAAAGGAACTGATTAAGGAAATTGGAATATTAGAATTAGAAGTCAAGTATTTGGAACGATATCTGCTCTCTTTGTATCGGAAAAGATTTGATGAACACATTTCATCACTGTCAACCAAAGAAAGAAGATTGGAAGCAGCTTCATACATTAACAAAAGTACTTCTGCATTAAGTTGCAATGATTCTATCCTTGACAAACAAAGAAGAATGGAATTAGCATCACACATTAACAAAGTAGCTTCTGTAGTACCTGACAGTGGTGCTATCTCTGACAAAGAAATGTCCATTTCGTACTCAAGCGATAACATCTCAACAAGTAATTTAGGTGGTTTTCAACTCAAGGAATGCAATAACCAGTTAGAACCAGAATCTGTTTTAGACTCTAGTATTCATCGGTGTTACTCTGCATTATCTCAACAAACAGCTTGCTCGATTGAGGCTTCTTCTGAGGACATTAGGACCAAAGCTGCAGAGTCTTACCATTCTCTACCATTGTTCATGCTAGAGCAAGCTCAGTGTGCTAAATCCAACTCAACTAGCCTAGCAGAACAGTTTGGGAATAGTTACATTGACAATGTTCAAGAGACACCGAATTGGCTTTCTGAGGAGATGATAAAATGCATATCAGCTATATATTGTGAACTTTCAGACTCACCTTTTCATAAAAATGCTTCATCACCCGGTTATGAGGTATCTTCAAAGAACCAGGGTGGTAAGCGGGGATCACAGTGGAAGAAGCATTCATTATTCAATTTAAACTCCAGCAACCCTTTCCATATCAAAGGGTCAAAAAAATTTAGCGGACCTTATGGTTCAATGATAAGGATTCAGAAATTATGCACAGATAGTCAGAAATTAAAAGAAAATGAGTACATGCTACGCAGATTTAGGTCACTTGTTTCTCGTCTGCAAGAAATTAATCCGAGAAATATGCAACACGAAGAAAAGCTAGCCTTTTGGATTAATGTGCACAATGCCTTAGTAATGCATGCCTTGTTAGTTTACGGAATTTCAGCCAACAATGTCAAAAGAATGTCTACAGTACTCAAAGCTGCATATGACATTGGGGGTCATACTGTCAGTGTAGAAATGATACAAAACTTCATTCTGGGGTGCAGATTGCCTAGCACAGGACAATGGCTGCGACAGTGGTTTCCTTCTTTGACAAAGCCAAAGGTCAGAGATATAAGAAAAGGATATGCTATACGTCGTCCAGAACCTTTATTACTATTTGCTCTTAGCACAGGAAGCCATTCTGATCCCGCGGTACGTTTGTACACATCCAAGAGACTCTTGGAGGAGCTACAATCTGCGAAAGAAGAATACATTCAGTCCAACATCACTATAACCAAGGAACATAAAATAATTCTCCCAAAGATAGTTGATTCCTTTGCAAAATGTTCAGGTCTAGGAGCACCTGATTTGGTGGAAATGGTTAAGCCTTATCTACCTGAGTCTCAAAGGAAGAGCATCCAAGAGTTTCAATCAAAGGCAAGCTGGAAAGGCATTGAGTTAACCCCTCATGACTTCACTTTTCATTGCCTGCTTTCAAAGGAATTAGCTTGGTAA 1824 0.3882 MHDIMSHQYGLKQCMLIMDQPVSVSSHKRSNSDPMKWRVMEDEFVNIRESSYQPKVELGYQKQNIESKKRQYNNMDLQSSLTQEAAKELIKEIGILELEVKYLERYLLSLYRKRFDEHISSLSTKERRLEAASYINKSTSALSCNDSILDKQRRMELASHINKVASVVPDSGAISDKEMSISYSSDNISTSNLGGFQLKECNNQLEPESVLDSSIHRCYSALSQQTACSIEASSEDIRTKAAESYHSLPLFMLEQAQCAKSNSTSLAEQFGNSYIDNVQETPNWLSEEMIKCISAIYCELSDSPFHKNASSPGYEVSSKNQGGKRGSQWKKHSLFNLNSSNPFHIKGSKKFSGPYGSMIRIQKLCTDSQKLKENEYMLRRFRSLVSRLQEINPRNMQHEEKLAFWINVHNALVMHALLVYGISANNVKRMSTVLKAAYDIGGHTVSVEMIQNFILGCRLPSTGQWLRQWFPSLTKPKVRDIRKGYAIRRPEPLLLFALSTGSHSDPAVRLYTSKRLLEELQSAKEEYIQSNITITKEHKIILPKIVDSFAKCSGLGAPDLVEMVKPYLPESQRKSIQEFQSKASWKGIELTPHDFTFHCLLSKELAW* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2260 607 PANTHER UNCHARACTERIZED 84 607 - -
Tpr3g2260 607 Pfam Protein of unknown function, DUF547 393 528 IPR006869 -
Tpr3g2260 607 Pfam Leucine-zipper of ternary complex factor MIP1 77 117 IPR025757 -
Tpr3g2260 607 PANTHER TERNARY COMPLEX FACTOR MIP1 LEUCINE-ZIPPER PROTEIN 84 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2260 Tpr-Chr3 21261679 21266381 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2260 - - cam:101514616 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2260 3 21261679 21266381 Tpr3g2260 3 21261679 21266381 ECH