Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2256 ATGTCTGTCTTTCTCATGACATGTGAATCAGCAGCTCAACTGCGCAACGCTGGAACAGTCACAGTCAGAGAATCAAATTTGAAGAAGTTGGGTGCTACCCATTTCAAAACTGGTGTTCAAGATGAGCATTTTGAGGTAACAAAGCAAGCACTTTTGGAGACAATAGAAGAAGCAGTGCCTGAGATGTGGTCAGCAGCTATGAGAAATGCTTGGGGAGAAGCTCATTATCAACTAGCCAATGCCATCAAAGCTGAAATGAAAGACGCTCATGATCAGCATTCCAATGCCAATTTGATAACTGTTAACATGGAAGAAAACAAGGGAAATTGTTTCACAGAGGAGCAAGAAGCTCTTGTGGTGAAGTCATGGAATGCAATCAAGAACAACTCTGGAGATCTCAGTCTCAAGTTTTTCAAGAAAATACTGGAGATTGCTCCACCAGCTAAGCAATTGTTCTCATTCTTAAAAGATTCAAATGTTCCTTTGGAGCAAAATCCTAAGCTCAAGCCTCATGCCATGTCTGTGTTTATCATGACATGTGAATCAGCAGTTCAACTGCGGAAGGCTAGTAAAGTTACTGTTAGAGAATCAAACTTGAAGAAGTTAGGTGCCACTCATTTCAAAACAGGTGTAAAAGAAGAGCATTTTGAGGTAACAAAGCAAGCACTTTTGGAGACCATAAAAGAAGCAGTACCTGAGATGTGGTCAGCTGCTATGGAAAATGCATGGGGAGAAGCTCATGATCAGCTGGCCAATGCCATCAAAGCTGAAATGAAAAAAGAGCACTGA 789 0.4132 MSVFLMTCESAAQLRNAGTVTVRESNLKKLGATHFKTGVQDEHFEVTKQALLETIEEAVPEMWSAAMRNAWGEAHYQLANAIKAEMKDAHDQHSNANLITVNMEENKGNCFTEEQEALVVKSWNAIKNNSGDLSLKFFKKILEIAPPAKQLFSFLKDSNVPLEQNPKLKPHAMSVFIMTCESAVQLRKASKVTVRESNLKKLGATHFKTGVKEEHFEVTKQALLETIKEAVPEMWSAAMENAWGEAHDQLANAIKAEMKKEH* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2256 262 ProSiteProfiles Globin family profile. 3 87 IPR000971 GO:0020037
Tpr3g2256 262 PANTHER LEGHEMOGLOBIN-RELATED 1 91 IPR001032 GO:0019825|GO:0020037
Tpr3g2256 262 PANTHER LEGHEMOGLOBIN-RELATED 101 260 IPR001032 GO:0019825|GO:0020037
Tpr3g2256 262 PANTHER NON-SYMBIOTIC HEMOGLOBIN 1 91 - -
Tpr3g2256 262 PANTHER NON-SYMBIOTIC HEMOGLOBIN 101 260 - -
Tpr3g2256 262 ProSiteProfiles Globin family profile. 111 259 IPR000971 GO:0020037
Tpr3g2256 262 PRINTS Plant globin signature 112 129 - -
Tpr3g2256 262 PRINTS Plant globin signature 137 157 - -
Tpr3g2256 262 PRINTS Plant globin signature 165 193 - -
Tpr3g2256 262 PRINTS Plant globin signature 230 256 - -
Tpr3g2256 262 Gene3D Globins 110 257 IPR012292 GO:0019825|GO:0020037
Tpr3g2256 262 Gene3D Globins 1 85 IPR012292 GO:0019825|GO:0020037
Tpr3g2256 262 Pfam Globin 2 81 IPR000971 GO:0020037
Tpr3g2256 262 Pfam Globin 136 254 IPR000971 GO:0020037
Tpr3g2256 262 ProSitePatterns Plant hemoglobins signature. 165 176 IPR019824 GO:0019825|GO:0020037
Tpr3g2256 262 SUPERFAMILY Globin-like 3 88 IPR009050 -
Tpr3g2256 262 SUPERFAMILY Globin-like 110 260 IPR009050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2256 Tpr-Chr3 21213160 21235906 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2256 - - mtr:MTR_0026s0210 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2256 3 21213160 21235906 Tpr3g2256 3 21213160 21235906 ECH