Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2250 ATGAATGAATTACCTGGCTCAGTAGGCACAAGTGCCAGCTTCAGTCTGAGAATAGGCCAGACCTTGTTTTCATCTGCTTCTCTTCTCTTTATGTCTTTGGGGGTTGAATTCTACAGCTACACAGCTTTCTGTTATTTGGTGACAATCATGGGTTTGGTTATACCTTGGAGTTTCACATTAGCATTGGTAGATGGATACTCTGTACTGGTCAAATGCCCCATTCGTCAACCAGGAATACTGTTGATTATTGTTGTCGGAGATTTGGTACTATCAACCCTCACACTAGCAGCAGCTTCCTCAACAGCTAGTGTTATAGATCTCCTGCTTAATTCTGAAGGATCTTTTTGCCCTATAAAGCTTTGCTGCAGGTACAGGATATCTGCAGTTATGGCCTTTGTGTCATGGTTTCTGTCCTTGGCATCCTCTCTTTTTAACCTTTATCTGTTACCCTCTTTGTGA 459 0.4227 MNELPGSVGTSASFSLRIGQTLFSSASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLVKCPIRQPGILLIIVVGDLVLSTLTLAAASSTASVIDLLLNSEGSFCPIKLCCRYRISAVMAFVSWFLSLASSLFNLYLLPSL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2250 152 Pfam Casparian strip membrane protein domain 9 137 IPR006702 -
Tpr3g2250 152 PANTHER CASP-LIKE PROTEIN 5B3 1 151 IPR045009 -
Tpr3g2250 152 PANTHER CASP-LIKE PROTEIN 5C3 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2250 Tpr-Chr3 21134465 21136626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2250 - - gmx:100810360 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2250 3 21134465 21136626 Tpr3g2250 3 21134465 21136626 ECH