Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2222 ATGGCTGTCAACGACGCCGATCAATCTCACAAACCTCACAGGTTACGTCAAGCCGGTCCCAAGAAGAAGACCAACAAGCCTAAGAAGAAACGAGATGGCGATGACGATGACGACGGTCAGATTATGCAAAACCCTAAAGCTTTCGCATATTCTTCATCGAAAAAAAATAAAAGATTGCAATCACGCACCGCCGAGAAAGAACAGCGCCGTCTTCATGTTCCTATTATTGATCGTAGTTACGGTGAACCTCCTCCTTTTGTCATTGTTGTGCAGGGTCCTCCTCAGGTTGGGAAATCACTTTTGATTAAGTCTTTGATTAAGCATTATACAAAGCAAAACTTGCCTGAAGTTCGTGGTCCAATTACAATTGTATCAGGAAAGCAAAGGCGGTTGCAATTTGTGGAATGCCCAAATGATATCAATGGAATGATAGATGCGGCTAAGTATGCTGATCTAGCACTTCTTCTTATAGATGGAAGTTATGGTTTTGAAATGGAAACATTTGAGTTTCTCAATATTTTGCAAGTTCATGGGTTCCCAAAGGTCATGGGGGTTCTTACTCATCTTGATCATTTCAAGGATGTTAAAAAGTTGAGGAAAACGAAACAACGGCTCAAACACCGATTTTGGACCGAAATATATGATGGAGCTAAATTGTTTTACTTATCTGGCCTTATTCATGGAAAATATGTCAAGCGTGAAGTTCACAATCTTGCTCGATTCATATCAGTCATGAAGTTTCATCCTTTATCTTGGCGAACTTCCCATCCCTATGTTTTGGTGGATCGTTTTGAAGATATCACTCCTCCTGAACAAGTGCATGCAAATAATAAATGTGACAGAAAAGTCACACTTTATGGCTATCTTAGAGGTTGTAATTTGAAAAGTGGCAATAAGGTCCACATAGCTGGAGTGGGTGATTATAGTTTAGCTCATGCAACTGGTTTACCCGATCCATGCCCTCTTCCATCTGCTGCCAAAAAGAAAGGACTGCGTGATAAAGAAAAGTTGTTTTATGCTCCCATGTCTGGTGTTGGGGATCTTTTGTACGATAAAGATGCTGTGTACATAAATATTAATGATCACTTTGTTCAATTTTCAAAAGTTGATGATGGAAACTCTGCTATGACGAACAAAGGAAAGGAAAGGGATGTAGGAGAGGTGTTGGTGAAATCTCTTCAGGATACCAAATTCTCAATCAATGAAAAGCTAGAGAATAGCTTCATCAATTTTTTTGGCCAAAGGCTAAAAGTGTCACCAGACGCTCTAGGTGATGCACCAGGTACAAACAATGATGTAGAGCAGGATGGAAATCTGGAGACTCAGCCTGTAGCTGGTATGGGTGGTAAAGATAATAATGAAATGGATTCTAATGGTTCAGAATCGTCTGATGACGATGAGGTCCATGATCCTGATGTTGATGGCGATGCCAGTAAAACTACAAATGGTAACCACTTAAATGAACAGATTGAGTTTCACAATGGAAGACAAAGGAGAAAAGCAATCTTTGGAAATGATGTTGATCAAAGTGATCTAGTGGATTCAGAAGAAGAAGAAGATGATGAAGAAGAAGATGATGAAGAAGAAGATGAAGAAGAAGAGGATGGGGAATCTTCCGATTCAGAATCTTCAAAAGAGGATGAAGATGACACGGATGAAGATGACGTGGGAAATGTTTCGAAGTGGAAGGAGTCGCTGGCTGAAAGAACACTCGCACGAAAAGCTACTAGTTTGAAGCAAGTCGTGTATGGGGAATCTACTAATAATTCAACTTCTATGAATGAAGAGTATGATAGTGGTGAGGATGACGAAGACTTTTTTCTTCCTATAGAAGAACAAATGAAAAAGCAAAAAAGTAGACATGGACCGGATGATACAATGGTTGACGCTGAGGATTGTTCCAAGTGTGTCAAACTTATGAGCCAGAAATGGAATGAGAAAGATAACGAGGAGATTCGCAACCGTTTTGTGTCTGGGAATTTGGCAAAAGCTGCACTCAGAAATTCACAGCAAAAAGCTAATACTGAAGAGAAAGATGATGTCTATGGTGACTTTGAAGATTTAGAAACAGGAGAAAACTACAAGTTTTATCTGACAGATAATGCGACAACAACACAGATGGGAGTTGATTCAGTAGCTGAGGAGCGGAGGCTTGAGAAACTTGCTAAACGCGCAATATTTGATTCTCAATATAATGATGACCCTGGGACACCAGAGGAAGAGACTGGAAATGAAAATGAAGCCAAGATTCATCGTGATCAACCCAATGAAAGTAACTATCTTGACAAGTTAAAGGAGGATATTGAGCTTCAAAAACAAACGAATATTGCTGAACTGAACGATCTTGATGAGGATACAAGATTAGAGTTAGAAGGCTTCCGAACCGGGACATACTTACGATTGGAGGTTCATAATGTTCCGTATGAAATGGTTGAACACTTTGATCCCTACCATCCAATATTGGTTGGAGGGGTTGGTTTAGGGGAGGAAAATGTTGGATACATGCAGGCCAGGTTAAAGCGGCATAGGTGGCACAAGAAAGTCCTGAAGACTAGAGATCCAATTATTGTTTCGGTTGGATGGAGGCGTTACCAGACAACACCAGTTTATGCTATTGAGGATCACAATGGAAGGCATCGAATGCTAAAATACACTCCAGAGCACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCACCTCCCAACACTGGAATAATTGCTGTTCAGACTTTATCAAACAATCAGGCAACTTTTAGGATTACCGCAACTGCAGTTGTTGTTGAGTTTAATCACGCTGCAAGGATAATGAAGAAAATCAAATTGGTTGGCTATCCGTGCAAGATATTCAAGAAAACAGCACTTATCAAGGATATGTTTACTTCAGATCTTGAAGTACCTCGGTTTGAAGGAGCGGCTATTCGAACAGTCAGTGGGATTAGGGGACAGATCAAGAAGGTTGCAAAAGAAGAGTTAGGTAACAAACCAAAAAGGAAGGGTGGGCAAACCAAAGAAGGGATTGCTAGATGTACTTTTGAAGACAAAATTCTGATGAGTGACATTGTTTTCCTGCGAGCATGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCCTTAACAACAGCATTGCAGCCACGCGACCAGACCTGGAAAGGAATGAGAACTGTTGCAGAATTGAGAAGAGATCACAATCTTCCTATACCTGTAAACAAAGATTCTCTTTACAAGAAAATTGAAAGGAAGCCTAGAAAGTTCAATCCAGTGGTGATTCCCAAGAAGCTACAGGCAAATCTTCCCTTTGAATCAAAACCTAAACATCAACCCAAGCGAAAAAGGCCTAGGCTTGAAGAGAGAAGGCAAAAGGGTGTTATTGAAGAATCTCATGAGCGGAAAATTCGTGGTCTTGTTCAACAATTACAGTTAATGAACAATACCAAGATGAAAAAACGAAACCTTAAGGAAAAGGAAAAGAAAAAAGCTTGGGAAAAAGAGAAAAAGAAAGAGGAGGAGTTGTCGAAAAAGCGCAAGAGAGAGGAAAGACGAGAAAAATACCGGAAAGAAGACAAGCTCAATAAGAAAAGTCGAAGAGCCTAG 3594 0.4029 MAVNDADQSHKPHRLRQAGPKKKTNKPKKKRDGDDDDDGQIMQNPKAFAYSSSKKNKRLQSRTAEKEQRRLHVPIIDRSYGEPPPFVIVVQGPPQVGKSLLIKSLIKHYTKQNLPEVRGPITIVSGKQRRLQFVECPNDINGMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDHFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEQVHANNKCDRKVTLYGYLRGCNLKSGNKVHIAGVGDYSLAHATGLPDPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYDKDAVYININDHFVQFSKVDDGNSAMTNKGKERDVGEVLVKSLQDTKFSINEKLENSFINFFGQRLKVSPDALGDAPGTNNDVEQDGNLETQPVAGMGGKDNNEMDSNGSESSDDDEVHDPDVDGDASKTTNGNHLNEQIEFHNGRQRRKAIFGNDVDQSDLVDSEEEEDDEEEDDEEEDEEEEDGESSDSESSKEDEDDTDEDDVGNVSKWKESLAERTLARKATSLKQVVYGESTNNSTSMNEEYDSGEDDEDFFLPIEEQMKKQKSRHGPDDTMVDAEDCSKCVKLMSQKWNEKDNEEIRNRFVSGNLAKAALRNSQQKANTEEKDDVYGDFEDLETGENYKFYLTDNATTTQMGVDSVAEERRLEKLAKRAIFDSQYNDDPGTPEEETGNENEAKIHRDQPNESNYLDKLKEDIELQKQTNIAELNDLDEDTRLELEGFRTGTYLRLEVHNVPYEMVEHFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDHNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIIAVQTLSNNQATFRITATAVVVEFNHAARIMKKIKLVGYPCKIFKKTALIKDMFTSDLEVPRFEGAAIRTVSGIRGQIKKVAKEELGNKPKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRRDHNLPIPVNKDSLYKKIERKPRKFNPVVIPKKLQANLPFESKPKHQPKRKRPRLEERRQKGVIEESHERKIRGLVQQLQLMNNTKMKKRNLKEKEKKKAWEKEKKKEEELSKKRKREERREKYRKEDKLNKKSRRA* 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 491 505 - -
Tpr3g2222 1197 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 713 1031 IPR007034 -
Tpr3g2222 1197 Coils Coil 1135 1187 - -
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 556 570 - -
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 727 758 - -
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 1 70 - -
Tpr3g2222 1197 Pfam AARP2CN (NUC121) domain 234 319 IPR012948 GO:0005634|GO:0042254
Tpr3g2222 1197 SMART aarp2cn2 234 320 IPR012948 GO:0005634|GO:0042254
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 1147 1189 - -
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 1117 1133 - -
Tpr3g2222 1197 Gene3D - 86 248 IPR027417 -
Tpr3g2222 1197 Coils Coil 513 533 - -
Tpr3g2222 1197 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 83 248 IPR030387 -
Tpr3g2222 1197 PANTHER RIBOSOME BIOGENESIS PROTEIN 455 1190 IPR039761 GO:0042254
Tpr3g2222 1197 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 415 IPR039761 GO:0042254
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 1096 1197 - -
Tpr3g2222 1197 SMART DUF663_2 708 1030 IPR007034 -
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 742 758 - -
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 443 601 - -
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 580 595 - -
Tpr3g2222 1197 CDD BMS1 47 276 IPR037875 GO:0005525
Tpr3g2222 1197 MobiDBLite consensus disorder prediction 510 555 - -
Tpr3g2222 1197 PANTHER BNAC08G44910D PROTEIN 1 415 - -
Tpr3g2222 1197 PANTHER BNAC08G44910D PROTEIN 455 1190 - -
Tpr3g2222 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 222 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2222 K14569 - gmx:100810906 1705.26