Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2216 ATGGCAAATCTAGTTCCTGGGGTGCTTTTAAAGTTAATGCAGCATATGAACACAGATATAAAAGTGGGTGGTGAACATAGATCATCATTGTTACAAGTTGTGAGTATTGTTCCAGCATTATCAGGTGGAGATTTGTTTACAAATCAAGGCTTTTATGTTAAGGTTTCTGATTCATCACATGCTACTTATGTTTCTCTACCTGATGAACATGATGATCTAATCCTTAGTGATAAGATTCAGTTAGGACAGTTTGTTTTTGTCGATCGGTTAGAAGCTGCTTCGCCTGTTCCGATTATTCGTGGTGTTAGGCCTGTTCCTGGTAGACATGCTTGTGTTGGAACACCTGAAGATATTGTTGCAACTAACTCACTTGGTTTTCTTAGCAATGTTTCTGAGGTTAAGGTTAAGGTTAATAAGAATGGTGTTAGTTCGAAGTCGATGATGAAAGTGTTGGACAATCATCAAGAACAATTGGATAAGAAATCATTGGTTTTTGGTAGAAGTAAATCTCAAACAACAAAAGATTCTTCTGTTGTTGATTTTGTGAAGAAGGAAAAGTTACCAAGATTGAAGTCATTGAATTCAAGGAGTATTGTTCCTTCTTCACCTACTAGTTGCTATTCTTTGTCACCTTCTTTTGAGAAATTTTCTAATAGTGTTAAGCAACAAGGAAATATTAATGGAGTCGATAAGCTAATTGCTAAGGTGGGAGTGGTGGAGACAGGAAAAGGCGGTCGCGGTATTAGTCCTCTCGGGAAGAGAATTGCAGTTGGAAATTCGATCAGAAATTTGGTTCAAGGAATTGAGCTTGGTGCTAAAGCGTTGAGGAAAAGCTGGGAAGGGAACATGGAAGTTAAGAATAATAAAGAGAAATTAAGGGCTTCTTCGAAGAGTGATCTTAAGCCGGAATTTCGTAGCACAACTCCTAGGAAAAGTACATCAAGTGAGAAGTTTCCATCTAGAGATTATGAGAGTAAGACACAAGCATCAACCAAGTCGTCTTCTAAGGAAGAGAACAAGATTCAGAAATCTATAAAGAAAGTTGTTGGCGATGGTACTACGGAAGAACAAGAGAAGTTAAGTAAGCCAAGGAATTCTTTCGGAAAGAAGTCATCAGAAGCCGGACTTCCTGGAAACTTGGTCAAGGTTTCGATAAATAGTAAAAAAGTGACAGATGCAAGTATTCAATGGACTTCACTTCCTTCATCCATTGCAAAACTTGGCCGGGAAGTAATGAAGCATAGAGATGCAGCACAGATGGCAGCAACTGAGGCTATGCAAGAGGCTGCTGCTGCCGATAGTTTGCTGCAATGTCTTAGTGTATATGCAGAGCTAAGTAATTCTGCTAAGGAACATAACCCTCAGCTTACAATTGATCAATTTTTAACTCTTCACACGAGTTTGAATAGTGCGTGGATGATCACAGACTCACTTTCTAAAACCATTTCAGACAGTTCATCTCAAGATAATGAAAGAATCACAACAGAAGAAGAACTAAAACTCAAATCAGATAGGCAAAAGCTTGCAGCTTCTTGGGTTCAAGCTGCATTATCCACTAATCTATCATCCTTTTCTGTTTATAGCCAAGAACCTCTATCATCGAAGCTTGCAGTTTCGACTACAAGTAACTCTCAAAATCAAAAGAATGTCCTCGGAAGTAAACCAATTTTAGTCCTAGAAAATTCAAGAGAAGACGCTTCAACAAAATCTCAAGGAAAAACCCGTCAGGGAGCTGCTAATTCCAAACAAACGTTACAAGGAACTCCGCGAAAACAAGGTGATGGATTATCAAATGGGAAAAAGCAACTAGTCCAACCTCTTCCAGATTGGATTAGAGGAAACAGCGTTGATGAGGCGGTTAATTTGGCTGACATGCTACAATTGCGATCACGAGATTGGTTTTTGTTGTTTATTGAGAAATTCCTAGACAGTGATGGAGACAGTGGTTTGTCAAACAATGGTGAAATAGCAGGCATGCTCACTCAACTAAAAAGCGTAAACGATTGGTTGGACAAGATAGGATCAAGCAAGAATGAGAACGAGTCGTGCCAGATACCGGTAGAGACAATTGAGAGACTCAGGAAGAAAATATATGAATATCTTCTTACACATGTTGAATCTGCTGCTGCTGCACTTACTTGTGACTCACAATCATCAGAGATTAAAGGGAAAAAGTGA 2178 0.3898 MANLVPGVLLKLMQHMNTDIKVGGEHRSSLLQVVSIVPALSGGDLFTNQGFYVKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPIIRGVRPVPGRHACVGTPEDIVATNSLGFLSNVSEVKVKVNKNGVSSKSMMKVLDNHQEQLDKKSLVFGRSKSQTTKDSSVVDFVKKEKLPRLKSLNSRSIVPSSPTSCYSLSPSFEKFSNSVKQQGNINGVDKLIAKVGVVETGKGGRGISPLGKRIAVGNSIRNLVQGIELGAKALRKSWEGNMEVKNNKEKLRASSKSDLKPEFRSTTPRKSTSSEKFPSRDYESKTQASTKSSSKEENKIQKSIKKVVGDGTTEEQEKLSKPRNSFGKKSSEAGLPGNLVKVSINSKKVTDASIQWTSLPSSIAKLGREVMKHRDAAQMAATEAMQEAAAADSLLQCLSVYAELSNSAKEHNPQLTIDQFLTLHTSLNSAWMITDSLSKTISDSSSQDNERITTEEELKLKSDRQKLAASWVQAALSTNLSSFSVYSQEPLSSKLAVSTTSNSQNQKNVLGSKPILVLENSREDASTKSQGKTRQGAANSKQTLQGTPRKQGDGLSNGKKQLVQPLPDWIRGNSVDEAVNLADMLQLRSRDWFLLFIEKFLDSDGDSGLSNNGEIAGMLTQLKSVNDWLDKIGSSKNENESCQIPVETIERLRKKIYEYLLTHVESAAAALTCDSQSSEIKGKK* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2216 725 PANTHER DUF936 FAMILY PROTEIN 1 720 - -
Tpr3g2216 725 MobiDBLite consensus disorder prediction 286 306 - -
Tpr3g2216 725 PANTHER EXPRESSED PROTEIN 1 720 IPR010341 -
Tpr3g2216 725 MobiDBLite consensus disorder prediction 286 373 - -
Tpr3g2216 725 MobiDBLite consensus disorder prediction 561 599 - -
Tpr3g2216 725 MobiDBLite consensus disorder prediction 571 599 - -
Tpr3g2216 725 MobiDBLite consensus disorder prediction 331 366 - -
Tpr3g2216 725 Pfam Plant protein of unknown function (DUF936) 4 712 IPR010341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2216 Tpr-Chr3 20777372 20781339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2216 - - cam:101502171 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4589 7 54340444 54346497 Tpr3g2216 3 20777372 20781339 PCT