Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2213 ATGGCGGTTGACGATCGCTTCACAGATTTCAACCCTAAAACGTGTGTGGTTTTAGGCGGAAGAGGAATCTTAGGAAAATCATTGGTCTTAAAGCTATTGAAACTCGGTGATTGCATCGTCCGAGTCGCTGATTCCACTCACTCACTACAACTTGACCCTTCCGAGTCTCTCCTCGATGAAGCTATCTCTTCTTCTCGCGCTTCGTACTTTCATCTCGACCTTACCGATAAACACCGCATCGCCAAAGTTCTTGAAGGTTCTTCCGTCGTTTTCTATATGGATGTTGATGGCTCTAATAATACCGATGATTTCTACCATTGTTATAAGCTAATTGTTCAAGGTGCGAAGAATGTGATTAATGCTTGCAGAGAATGTAAAGTGAAACGCCTCATATACAACAGTTCTGCAGATGTTGTATTTGATTGTTTGCGTGATGGAGATAAATCGTCGGCATATCCGTGGAAAGTTGATAACATGTTAATTGACCTTAAGGCTCAAGCAGAAGCTTTGGTCTTGAATGCTAATGACATTGATGGAGTTTTGACATGCTCACTTCGTCCTAGTAATGTATTTGGTCCTGGTGACACAGAATTTGTGCCATATATTGTAAAGCTAGCAAGATATGGTGTCACAAAGTTTATTGTAGGGACCGGTGATAATCTGTCAGACTTCACCTTTTATGAGAATGTTACTCATGCCCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAACCATTTCTGTGGCTGGAAAGGCATTTTTCATCACAAATCTCGAGCCTATGAAGTTCTGGGAATTTCTGTCGCTTTTATTGGAAGGTCTTGGATATCAAAGGCCATTCATCAAACTTCCTGCCAATTTAGTGCAATACATTCTCTCAATTTTAAAGTGGTTTTATGAAAAGTTGGGGCCCGGACACTTCAATTATCCATTATTAGTTCATTATTTCCGGTTAGCTTTACACACCCGAACTTTCAACTGCTCTGCAGCTCAAAAAGATATTGGATACTCACCGATAGTCTCCCTTGAGGAAGGTGTCACATTAACCATAGAATCATTCTCTCATTTAGCTAAAGATTCATTTTCTTCAAGATGCTGCGGGTCTGTTGATCGGTCAAAAGCAGATAAGCTGCTTGGCAGTGGAAAAGTGGCTGACATTTTGTTGTGGAGAAACGAGAAGGCATCCTTCGCATATTTCCTTGGGCTAGTTTTTTTGTTTTATTGGTTTTTCCTTTCTGGAAACACTTTTATATCATCTGCTGCAAGGCTTTTGCTGCTTGTGACTTTACTTCTATGTGGACATGGTTTCCTGCCATCAAAGCTATTTGGTTTCCCTATACAGAAGGTGCCTGCATCTAATTTTAAGATCTCTGATATGGCAGCAAAAGATTCAGTTGCAATTATAGTACATATATGGAACAAGGGGTTTCAAAATATAAAGGAACTGGGCCAAGGGGGCGATTGGTCTACGTTTTTCAAGGTTGCAGTTTTTCTTTACCTTCTGAAGTCGATCGTGGCCAAGTTGTTGACAACATTGATAGGCATAGGACTTGCCTTTGCGTTTATGGCATTCTTTGTTTATGAGCAATATGAATCAGAAATTGATGAACTAGCGGATTTTCTAACCACTAGTTTGAAGGAGTTCATGATATATTTGATGAGAAATTTACCTGTCTCTGTATCACGGCTTCTGCATTATGGCGACAACTTCAGCGTTCCCAAGGACCGGGATGGGGGAAAGATCTGA 1746 0.4055 MAVDDRFTDFNPKTCVVLGGRGILGKSLVLKLLKLGDCIVRVADSTHSLQLDPSESLLDEAISSSRASYFHLDLTDKHRIAKVLEGSSVVFYMDVDGSNNTDDFYHCYKLIVQGAKNVINACRECKVKRLIYNSSADVVFDCLRDGDKSSAYPWKVDNMLIDLKAQAEALVLNANDIDGVLTCSLRPSNVFGPGDTEFVPYIVKLARYGVTKFIVGTGDNLSDFTFYENVTHAHICAEEALNFQTISVAGKAFFITNLEPMKFWEFLSLLLEGLGYQRPFIKLPANLVQYILSILKWFYEKLGPGHFNYPLLVHYFRLALHTRTFNCSAAQKDIGYSPIVSLEEGVTLTIESFSHLAKDSFSSRCCGSVDRSKADKLLGSGKVADILLWRNEKASFAYFLGLVFLFYWFFLSGNTFISSAARLLLLVTLLLCGHGFLPSKLFGFPIQKVPASNFKISDMAAKDSVAIIVHIWNKGFQNIKELGQGGDWSTFFKVAVFLYLLKSIVAKLLTTLIGIGLAFAFMAFFVYEQYESEIDELADFLTTSLKEFMIYLMRNLPVSVSRLLHYGDNFSVPKDRDGGKI* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2213 581 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 11 489 - -
Tpr3g2213 581 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 489 - -
Tpr3g2213 581 Gene3D - 6 357 - -
Tpr3g2213 581 Pfam Reticulon 383 539 IPR003388 -
Tpr3g2213 581 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 284 IPR002225 GO:0003854|GO:0006694|GO:0016616
Tpr3g2213 581 ProSiteProfiles Reticulon domain profile. 383 557 IPR003388 -
Tpr3g2213 581 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 355 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2213 Tpr-Chr3 20740454 20747521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2213 14 361 Lipid Metabolism Gene Families AT2G33630 26.810 2.92e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2213 K23558 - gmx:100814147 869.381