Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2208 ATGGGGAAGCCTTTGATATATGAGATCTTGGAAAAACCAGCCACAAGTTGTATTATAGCAATATGCAGTGCAATTTGGTTTTATATACAAAAGAAAAACATTGGTTATTCACATGTTGGTTTGAGTTATGAGACTGCTATGGAAGGACAATATTGGAGAATAATCACTTCTGCATTTTCTCATATAAGTATAATTCATCTTGTTTTTAACATGAGTGCACTTTGGAGTCTTGGTGTTGTGGAGCAATTGGATCATGTTGGTCTTGGTGTTGAGTATTATTTGCAGTATACACTTGTGTTGATTGTTGTATCAGGAGTGTTGGTTTTGGCAATGTATCACTTGTTGATTCAAAGATTCAAGGTTGATTATTTTCGTCGAGTGACTGCTGTTGGATATTCGTGCGTTGTTTTTGGTTGGATGACGATTCTTTCTGTGAAGCAACCTTCTTCCAAGTTGGAGCTTTTTGGATTTCTTTCGCTTCCTATTAGTTTTGCTCCGTTTGAGTCGCTTATTTTCACTTCGATTATTGTTCCTCAAGCAAGTTTTATTGGTCATTTATCTGGGATTGTTGTTGGATATGCTATAGCTTGGGGTTTGATTCATGGGATGACAAATTACTGGGCACTTTCGTTGTTGGGTTGGATTGTTCTTGTCTTTGTTTTGAGTTTGAAGAAATCTGGTGCACTTGACCTGAACTTCATTGAGATTGAATCTGTTACTGATCCATCTTTACCGTCTGTGCGGTTTTTGGGAACTGGCAATGGCAGAACCCTGCAGATGAGTGCATTGCCGGATGGAAATGTTGAACTTGTCTAA 816 0.3811 MGKPLIYEILEKPATSCIIAICSAIWFYIQKKNIGYSHVGLSYETAMEGQYWRIITSAFSHISIIHLVFNMSALWSLGVVEQLDHVGLGVEYYLQYTLVLIVVSGVLVLAMYHLLIQRFKVDYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMTNYWALSLLGWIVLVFVLSLKKSGALDLNFIEIESVTDPSLPSVRFLGTGNGRTLQMSALPDGNVELV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2208 271 Gene3D - 10 199 IPR035952 -
Tpr3g2208 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
Tpr3g2208 271 PANTHER RHOMBOID PROTEASE 1 271 - -
Tpr3g2208 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Tpr3g2208 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2208 Tpr-Chr3 20686642 20688091 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2208 - - gmx:100818954 488.034