Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2205 ATGGCCTCAAACACTTCCCTCCTCCCCGCCACCGGCGAAGGTCTAATCGTCAGTTTCGGCGAGATGCTAATCGACTTCGTCCCCACCGTCTCCGGCGTCTCCCTCGCCGAAGCTCCCGGTTTCCTGAAAGCACCCGGTGGCGCTCCAGCTAACGTCGCGATCGCCGTTTCACGACTCGGCGGTAAATCAGCCTTCGTCGGAAAACTCGGCGATGATGAATTCGGTCACATGCTCGCCGGGATCTTGAAAGAGAACAACGTTAGAGCCGATGGTATAAACTTCGATAAAGGCGCTCGTACTGCACTCGCTTTCGTCACCTTACGCGCTGATGGAGAGCGTGAGTTCATGTTTTACAGAAATCCTAGTGCTGATATGCTTCTTACACCTGAAGATCTCAATCTTGAACTCATCAGATCTGCAAAAGTATTCCATTATGGATCAATAAGCTTGATCGTGGAGCCATGCAGATCCGCACATCTGAAGGCAATGGAAGTTGCAAAGGATGCAGGGTGCTTACTCTCTTATGATCCTAACCTCCGGCTACCTTTGTGGCCCTCACCAGAGGAAGCCCGTAAGCAAATACTCAGTATATGGGACAAGGCTGATTTGATCAAGGTCAGTGATGTGGAGCTGGAATTTCTAACAGGGAGTGATAAAATTGATGATGAGTCTGCTCTCTCCTTGTGGCACCCTAATTTGAAGTTGCTTCTTGTCACTCTTGGAGAAAATGGTTCCAGATACTATACCAAGAATTTCAAAGGATCAGTAGATGCTTTCCATGTCAACGCTGTTGACACAACCGGTGCCGGTGATTCCTTTGTTGGAGCTCTGTTGGGCAAGATTGTAGATGATCAATCTATACTTGAAGATGAAGCAAAGTTAAGGGAAGTGCTCAAATTTGCAAATGCATGTGGAGCAATTACAACTACTAAAAAGGGTGCAATTCCAGCTCTTCCCACAGAAGCTGATGTCCTCAGCCTTATCAAAGATGCATAG 996 0.4789 MASNTSLLPATGEGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGKSAFVGKLGDDEFGHMLAGILKENNVRADGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPEDLNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKDAGCLLSYDPNLRLPLWPSPEEARKQILSIWDKADLIKVSDVELEFLTGSDKIDDESALSLWHPNLKLLLVTLGENGSRYYTKNFKGSVDAFHVNAVDTTGAGDSFVGALLGKIVDDQSILEDEAKLREVLKFANACGAITTTKKGAIPALPTEADVLSLIKDA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2205 331 Pfam pfkB family carbohydrate kinase 15 320 IPR011611 -
Tpr3g2205 331 PRINTS Ribokinase signature 41 60 IPR002139 GO:0016301
Tpr3g2205 331 PRINTS Ribokinase signature 236 247 IPR002139 GO:0016301
Tpr3g2205 331 PANTHER HEXOKINASE FAMILY MEMBER 20 327 - -
Tpr3g2205 331 CDD bac_FRK 15 315 - -
Tpr3g2205 331 SUPERFAMILY Ribokinase-like 16 328 IPR029056 -
Tpr3g2205 331 PANTHER BNAA04G18320D PROTEIN 20 327 - -
Tpr3g2205 331 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 46 70 IPR002173 GO:0016773
Tpr3g2205 331 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 265 278 IPR002173 GO:0016773
Tpr3g2205 331 Gene3D - 14 331 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2205 Tpr-Chr3 20659984 20664013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2205 K00847 - gmx:100780082 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4581 7 54285948 54288966 Tpr3g2205 3 20659984 20664013 PCT