Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2191 ATGGTTCTTCACCTTCCCTCTCCTGGGTTTGTTTCTGGGAGTTGGAAAATCAAAGTTGTGATCATCATGTCTTCTTCTCATTCCTTTCACAAATCCCCTCTCTCCAACACTACCACCGCTTCCGTCAACTCCGACTCCACCTCCACCTCCACCTCCGGAGTTAATGTCTACGTCAGAAGAAGGAACAAAAGACCCAAAGGAATCACCACCACCACAACTCCAACCCACACTCACAACAAAAAGTTTGGTCTGCCTGATATTGAAGACTTTGCATACAAAGGACCAAATGAATTGACTCAATGCATAAAATCAGAAGTGAGCTTAGATGTGACTCCAACTGAAAGTGAAATTGTTTCTACAACTCATAGCATTGAATCACCTGCACACTGGGTAGAGACGCTTGAAGGCATTCGCAAAATGAGATGTTCTGGAGATGCACCGGTAGACACTATGGGATGTGAGAAAGCTGGTTCTACACTACCTCCTAAGGAAAGAAGATTTGCTGTCCTGGTATCTTCTCTTTTATCAAGCCAAACCAAGGATCATGTTAATCATGGAGCAATTCAACGTCTTCTTCAAAATGATCTGCTTACTCCTGATGCAATCAACAATGCTGAAGAAGAAACTATCAAAAAGTTGATTTACCCAGTTGGGTTTTATACAAGAAAAGCCACTAACTTGAAAAAAATTGCAAATATTTGCCTCATGAAGTATGGCGGTGACATACCTAGCACACTTGAGCAACTACTCTTACTTCCAGGCATAGGTCCTAAGATGGCTCATTTGGTTATGAATGTTGCATGGAACAATGTTCAAGGGATATGTGTAGATACTCATGTTCACCGCATTTGCAATCGGCTAGGATGGGTGTCAAGATTGGGCACGAAACAGAAAACCTCGACACCTGAAGAGACAAGAGTGTCACTGCAAGGGTGGCTTCCAAGGGAAGAATGGGATCCAATAAATCCTCTATTGGTAGGATTTGGACAGACAATTTGTACACCTCTAAGACCTCGTTGCGGAGAATGCAGTATAACTGAGTTGTGTCCATCAGCATTCAAGGAGGCCTCAGATTCAAGCCCAGTTTCCAAGTCGACAAAGTCCCGAAGGAACAAGAAACTTTAA 1125 0.4302 MVLHLPSPGFVSGSWKIKVVIIMSSSHSFHKSPLSNTTTASVNSDSTSTSTSGVNVYVRRRNKRPKGITTTTTPTHTHNKKFGLPDIEDFAYKGPNELTQCIKSEVSLDVTPTESEIVSTTHSIESPAHWVETLEGIRKMRCSGDAPVDTMGCEKAGSTLPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNDLLTPDAINNAEEETIKKLIYPVGFYTRKATNLKKIANICLMKYGGDIPSTLEQLLLLPGIGPKMAHLVMNVAWNNVQGICVDTHVHRICNRLGWVSRLGTKQKTSTPEETRVSLQGWLPREEWDPINPLLVGFGQTICTPLRPRCGECSITELCPSAFKEASDSSPVSKSTKSRRNKKL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2191 374 Pfam HhH-GPD superfamily base excision DNA repair protein 171 300 IPR003265 GO:0006284
Tpr3g2191 374 SMART ccc3 332 352 IPR003651 GO:0051539
Tpr3g2191 374 MobiDBLite consensus disorder prediction 32 53 - -
Tpr3g2191 374 ProSitePatterns Endonuclease III family signature. 240 269 IPR004036 -
Tpr3g2191 374 PANTHER ENDONUCLEASE III HOMOLOG 2, CHLOROPLASTIC 74 369 - -
Tpr3g2191 374 Gene3D Hypothetical protein; domain 2 162 271 - -
Tpr3g2191 374 SMART endo3end 175 331 IPR003265 GO:0006284
Tpr3g2191 374 CDD ENDO3c 167 329 IPR003265 GO:0006284
Tpr3g2191 374 MobiDBLite consensus disorder prediction 354 374 - -
Tpr3g2191 374 Hamap Endonuclease III-like protein 1 [NTHL1]. 126 355 IPR030841 GO:0003906|GO:0005634|GO:0006281|GO:0006285|GO:0019104
Tpr3g2191 374 ProSitePatterns Endonuclease III iron-sulfur binding region signature. 333 349 IPR004035 -
Tpr3g2191 374 Gene3D - 272 349 IPR023170 -
Tpr3g2191 374 Pfam Helix-hairpin-helix motif 237 265 IPR000445 GO:0003677
Tpr3g2191 374 PANTHER ENDONUCLEASE III-LIKE PROTEIN 1 74 369 - -
Tpr3g2191 374 SUPERFAMILY DNA-glycosylase 140 363 IPR011257 GO:0003824|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2191 K10773 - gmx:100818398 499.975