Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2190 ATGACAGTAGCAGCAGGAATCGGGTACGCGTTGATAGCTCTAGGACCATCTCTCTCCATCTTCGTTTCCGTCATTTCCAAAAAGCCATTCTTAATTCTAACTGTTCTCGCCAGTACATTATTGTGGCTTATAAGCTTGATAGTGTTGTCTGGAATATGGAGGGGTTTTCTTCCACTGAATTCAACTGCATGGTGGCCTTATGGAATACTCATTTTATCATCTGTTGCTTTTCAAGAAGGCCTTAGGCTTTTCTTCTGGAAAATATTCAAGAGGTTAAAAGATATTTTAGATGCTTTTGCTGATAAAGTAGCAAAGCCACATCTTTTCCTGACAGATAAGATGCTGATTGCTCTGGCTGGTGGTTTGGGTCATGGTGTAGCCCATGCCGTGTTCTTCTGTATCAGTCTATTAACTCCTGCATTTGGACCAGCTACATATTTTGTTGATAAGTGTTCAAAGGTTCCATTTTTCCTTCTTTCTGCGATTATTGCTCTTGCATTTGTCACCATCCACACCTTTTCAATGGTCATTGCATTTAATGGGTATGCAGAGGGGAACAAAGTGGATCGTTATTTTGTTCCCATTGTTCACGTAGTTGCAGGGATGGTGACAATGGTAAATCTGGCACCTGGGGGTTGTGCTGTTGGCATTCCTCTCCTTTATTTCACCGCGATCTTGACCTTAATTCATTGTGGGAGGATGGTTTGGAGAAGATTGACGGAAAACCCAATAAGACCGACTCACTCGTAA 750 0.42 MTVAAGIGYALIALGPSLSIFVSVISKKPFLILTVLASTLLWLISLIVLSGIWRGFLPLNSTAWWPYGILILSSVAFQEGLRLFFWKIFKRLKDILDAFADKVAKPHLFLTDKMLIALAGGLGHGVAHAVFFCISLLTPAFGPATYFVDKCSKVPFFLLSAIIALAFVTIHTFSMVIAFNGYAEGNKVDRYFVPIVHVVAGMVTMVNLAPGGCAVGIPLLYFTAILTLIHCGRMVWRRLTENPIRPTHS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2190 249 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 241 IPR009294 GO:0016021|GO:0016485|GO:0043085
Tpr3g2190 249 Pfam Aph-1 protein 2 236 IPR009294 GO:0016021|GO:0016485|GO:0043085
Tpr3g2190 249 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 241 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2190 K06172 - gmx:100794637 445.277