Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2173 ATGGCAGCATTTGATTTCAAAGTTCTTCTGTTATTACTCTCTCTTTTATCCATTACTACTCATATCCATTCTTTTGAAGCTCTTCCTTTTCGTTTTGATGATTTTTCCGATCTCAATCGGAGCTGTTTCCCGCCAGACTTTGTTTTTGGAACAGCCTCCTCTGCTTTCCAGTATGAAGGTGCAGCACTTGAAGATGGAAAAGGACCAAGTATTTGGGATACTTTCACTCATAAATACCCAGAAAAAATAAGAGATAGAGCTAATGGAGATGTAGCTGACGATGCGTATCATCGATACAAGGAAGATATTGGAATCATGAAGGATATGAATTTGGATGCTTATAGATTCTCGATTTCTTGGTCTAGAGTGCTTCCAAAAGGAAAACTTAGTGGAGGTGTAAACCGCGAGGGAATAAAATACTACAACAACGTCATCAACGAAGTATTGGCTAATGGTTTGCAACCATATGTGACACTTTTCCATTGGGACGTTCCCCAAGCCTTAGAAGACGAGTATCGCGGTTTTCTAAGCCCTGACATTGTCGATGACTTTAGGGACTATGCTGAACTTTGCTTCAAGGAATTTGGTGATAGGGTGAAACATTGGATTACTTTGAATGAACCATGGAGTGTGAGCATGAATGCTTATGCATTTGGAAAATTTGCGCCAGGTCGATGTTCAGATTGGTTAAATCTGAATTGCACCGGAGGTGATTCAGGGAGAGAACCATATTTGACTGCGCATTACCAACTTCTTGCTCATGCTGCTGCTGCGAGACTGTACAAGACCAAATATCAGGCAACTCAAAACGGTAAAATAGGGATTACCTTACTCTCTCACTGGTATGAGCCGGCATCTAAAGAGAAAGCAGATGTTGATGCCGCAAGACGAGGCCTCGACTTCATGTTTGGATGGTTTATGCATCCACTCACAAAAGGCAGCTATCCGAGAAGCATGCGATCTTTGGTCGGGAAACGGCTACCAAAGTTCTCCAAAGAAGAATCCAAGAAACTTAAGGGGTCCTTCGATTTTCTAGGCCTAAACTATTATTCATCCTATTATGCTGCTAAAGCACCTCGCATACCGAATGCCATACCAGCCATACAAACTGATTCTCTTATTAATGCTACATTTGAACATGATGGCAAGCCCCTTGGTCCAATGGGTGCTTCCAATTGGTTATGCATTTATCCACGAGGATTTCGACAACTGTTACTTTACGTCAAAAATCACTACAACAACCCCGTAATTTACATTACAGAAAATGGTCGTGATGAGTTCAACGATCCAACACTGTCACTTCAAGAATCCCTTTTAGATACTTACAGAATTGATTACTATTACCGTCATCTTTATTATCTTGAAACTGCAATCAGGGATGGTGTGAATGTAAAGGGATATTTTGCATGGTCATTGTTGGATAACATGGAATGGGAATCTGGCTTCAGCTTGCGATTTGGACTCGTCTTTGTGGATTATAAAAACGACTTGAAAAGACACCCAAAACTCTCGGCGCATTGGTTTAAGAATTTCCTCAAAAAATCTTAG 1548 0.4089 MAAFDFKVLLLLLSLLSITTHIHSFEALPFRFDDFSDLNRSCFPPDFVFGTASSAFQYEGAALEDGKGPSIWDTFTHKYPEKIRDRANGDVADDAYHRYKEDIGIMKDMNLDAYRFSISWSRVLPKGKLSGGVNREGIKYYNNVINEVLANGLQPYVTLFHWDVPQALEDEYRGFLSPDIVDDFRDYAELCFKEFGDRVKHWITLNEPWSVSMNAYAFGKFAPGRCSDWLNLNCTGGDSGREPYLTAHYQLLAHAAAARLYKTKYQATQNGKIGITLLSHWYEPASKEKADVDAARRGLDFMFGWFMHPLTKGSYPRSMRSLVGKRLPKFSKEESKKLKGSFDFLGLNYYSSYYAAKAPRIPNAIPAIQTDSLINATFEHDGKPLGPMGASNWLCIYPRGFRQLLLYVKNHYNNPVIYITENGRDEFNDPTLSLQESLLDTYRIDYYYRHLYYLETAIRDGVNVKGYFAWSLLDNMEWESGFSLRFGLVFVDYKNDLKRHPKLSAHWFKNFLKKS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2173 515 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 33 514 - -
Tpr3g2173 515 SUPERFAMILY (Trans)glycosidases 34 513 IPR017853 -
Tpr3g2173 515 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 47 61 IPR033132 -
Tpr3g2173 515 Gene3D Glycosidases 26 514 - -
Tpr3g2173 515 Pfam Glycosyl hydrolase family 1 41 514 IPR001360 GO:0004553|GO:0005975
Tpr3g2173 515 PANTHER GLYCOSYL HYDROLASE 33 514 IPR001360 GO:0004553|GO:0005975
Tpr3g2173 515 PRINTS Glycosyl hydrolase family 1 signature 341 355 IPR001360 GO:0004553|GO:0005975
Tpr3g2173 515 PRINTS Glycosyl hydrolase family 1 signature 417 425 IPR001360 GO:0004553|GO:0005975
Tpr3g2173 515 PRINTS Glycosyl hydrolase family 1 signature 440 451 IPR001360 GO:0004553|GO:0005975
Tpr3g2173 515 PRINTS Glycosyl hydrolase family 1 signature 461 478 IPR001360 GO:0004553|GO:0005975
Tpr3g2173 515 PRINTS Glycosyl hydrolase family 1 signature 485 497 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2173 Tpr-Chr3 20123576 20127713 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2173 13 514 Glycoside Hydrolase AT5G44640 52.087 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2173 - K01188 gmx:100801874 801.201