Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2171 ATGGTAACATTTGATTTCAACGTGTTTCTGTTATTATTCTTTGTTTTATCCATTATTACTACTACAAATGCTGTTGATCCTCTTGCTCTTCCTCTTCGTCTTCAAGACTTCTCCGATTTTAATCGGAGTAGTTTTCCGCCGGATTTTATTTTTGGAACAGCCTCTTCTGCATTCCAGTATGAAGGTGGAGCATTTGAAGGTGGAAAAGGACCAAGTATTTGGGATACTTTCACTCATGAATACCCAGAAAAAATAAGAGATCGAGCTAATGGAGATGTAGCTTGCGACGCGTACCATCGATACAAGGAAGATATTGCAACCATAAAGGATTTGAATATGGATGCGTATAGATTTTCGATTTCTTGGTCTAGAATCCTACCAAAAGGAAAGCTCAGTGGAGGCATAAACCGTGAGGGAATAAACTACTACCACAATCTCATCAACGAAATATTGGCTAATGGTTTGCAACCATATGTGACACTTTTTCATTGGGACGTTCCCCAAGCCTTAGAGGATGAGTATGACGGTTTTTTAAGCCGTAACATTGTCGATGATTTTAGGGACTATGCTGAACTTTGTTACAAGGAATTTGGTGATAGGGTGAAACATTGGATTACTTTGAATGAACCATGGAGTGTGAGCATGAATGCTTATGCATATGGAAAGTTTGCACCGGGTCGGTGTTCAGATTGGTTAAATCTGAATTGCCTAGGAGGTGATTCGGGGACAGAACCATATTTGACTGCGCATTACCAACTTCTTGCTCATGCCGCTGCTACAAAACTATACAAGATCAAGTATCAGCAATCTCAAAAGGGTATAATAGGGATTACCTTACTCTCTCACTGGTATGAGCCGGCCTCTAAAGAGAAAGCAGATGTTGATGCTGCACATCGAGGCCTCGACTTCATGTTTGGATGGTTTATGGATCCAATCACAAAAGGAAACTATCCAAAAAGCATGCGATCTTTGGTGGGAAGCCGACTACCGAAGTTCTCCAAAGAAGAATCCGAGGATCTAAAAGGGTCCTTCGATTTTCTGGGCCTAAACTATTACTCATCCTATTATGCCACTGATGCACCTCACTTACGCGATGCCAGACCAGCCATACAAACCGATTCTCTTATTAATGCTACATTTCAAGTTAATGGCAAGCCCCTTGGTCCAATGTCTGCTTCTAGTTGGTTATGCATTTATCCGCAAGGACTTCGAAAACTGTTGCTTTACGTCAAGAATATGTACGATGATCCCATAATTTACATTACTGAAAATGGTCGCGATGAGTTCAACGATCCATCATTACCGCTTGAAGAATCCCTTTTAGATACTTACAGAATTGACTACTTTTATCGTCATCTTTACTCTGTTCAAAGTGCAATCAGGGATGGTGTGAATGTAAAGGGATATTTCGCATGGTCATTGTTGGATAACCATGAATGGGAATCTGGCTTCAGCTTGCGATTTGGACTCGTCTTCGTGGATTATGAAAACGACTTGAAAAGACACCGAAAACTATCGGCACATTGGTTCAAGAATTTCCTCCAAAAATCAAATCCAGAAAGGTGTTTTGTTTAA 1575 0.4057 MVTFDFNVFLLLFFVLSIITTTNAVDPLALPLRLQDFSDFNRSSFPPDFIFGTASSAFQYEGGAFEGGKGPSIWDTFTHEYPEKIRDRANGDVACDAYHRYKEDIATIKDLNMDAYRFSISWSRILPKGKLSGGINREGINYYHNLINEILANGLQPYVTLFHWDVPQALEDEYDGFLSRNIVDDFRDYAELCYKEFGDRVKHWITLNEPWSVSMNAYAYGKFAPGRCSDWLNLNCLGGDSGTEPYLTAHYQLLAHAAATKLYKIKYQQSQKGIIGITLLSHWYEPASKEKADVDAAHRGLDFMFGWFMDPITKGNYPKSMRSLVGSRLPKFSKEESEDLKGSFDFLGLNYYSSYYATDAPHLRDARPAIQTDSLINATFQVNGKPLGPMSASSWLCIYPQGLRKLLLYVKNMYDDPIIYITENGRDEFNDPSLPLEESLLDTYRIDYFYRHLYSVQSAIRDGVNVKGYFAWSLLDNHEWESGFSLRFGLVFVDYENDLKRHRKLSAHWFKNFLQKSNPERCFV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2171 524 SUPERFAMILY (Trans)glycosidases 35 515 IPR017853 -
Tpr3g2171 524 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 49 63 IPR033132 -
Tpr3g2171 524 Pfam Glycosyl hydrolase family 1 43 516 IPR001360 GO:0004553|GO:0005975
Tpr3g2171 524 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 31 516 - -
Tpr3g2171 524 PANTHER GLYCOSYL HYDROLASE 31 516 IPR001360 GO:0004553|GO:0005975
Tpr3g2171 524 PRINTS Glycosyl hydrolase family 1 signature 343 357 IPR001360 GO:0004553|GO:0005975
Tpr3g2171 524 PRINTS Glycosyl hydrolase family 1 signature 419 427 IPR001360 GO:0004553|GO:0005975
Tpr3g2171 524 PRINTS Glycosyl hydrolase family 1 signature 442 453 IPR001360 GO:0004553|GO:0005975
Tpr3g2171 524 PRINTS Glycosyl hydrolase family 1 signature 463 480 IPR001360 GO:0004553|GO:0005975
Tpr3g2171 524 PRINTS Glycosyl hydrolase family 1 signature 487 499 IPR001360 GO:0004553|GO:0005975
Tpr3g2171 524 Gene3D Glycosidases 29 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2171 Tpr-Chr3 20099790 20104702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2171 9 516 Glycoside Hydrolase AT5G44640 51.277 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2171 - K01188 gmx:100801874 801.201