Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2155 ATGAAGGCTTTTGTGTGTTTGTTGATGGTCCTTATGGTGTGTGGTTGTGCTGCTGTTATCAAAGAATGCACAAACAGTCCGACTCAATCACATACGCTTCGGTACGAGTTGTTGGCATCAAAGAATGGGACATGGAAGAAAGAAGTGATGTCTCATTATCATTTGACACCAACTGATGAATCAGCTTGGGTAGACTTGCTTCCAAGGAAGTTCTTATCAGAAGAACAAAAAAATGATTGGGCTGTTATGTATAGAAAAATTAAGAATATGGGTGTTTTTAAGCCACCTGTTGGATTTCTCAAAGAAGTGCCTCTTGAGGATGTGAGGTTGCTGGAAGGTTCAATTCATGCTGTGGCACAGCAGACTAATTTGGAGTATCTATTGATGTTAGATGTTGATCGGTTGCTTTGGAGCTTCAGGAAGATGGCTGGTTTACCAACTCCTGGTACGCCTTATGGAGGATGGGAGGCAACTAATGTGGAACTCAGAGGACATTTTGTTGGGCATTACTTGAGTGCATCAGCTCTAATGTGGGCCAGCACAAAGAATGATAGCCTGAAGGGGAAAATGACAGCTCTTGTTGCTGGTCTGTCCGCCTGTCAAGAGAAAATTGGAACGGGATATCTATCTGCATTTCCGCCCGAATTGTTCGACCGATTTGAAGATGTTAAACCTGTGTGGGCTCCATATTACACCATTCACAAGATCTTGGCCGGCTTGTTGGATCAATATACTATAGGTGGAAACCCTCAAGCTCTAAAAATGGTGACATTGATGGTCGATTACTTTTACAACCGAGTGATGAATGTAATATCACAGTACACTGTAACTAGACATTATCAATCACTGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGATTATATATCTTAACGGGGGATTCAAAGCATCTATTGTTGGCACACCTTTTCGACAAGCCGTGCTTTTTAGGGTTGCTTGCAGTACAGGCTAATGACATATCTGATTTTCATGCTAATACACATATCCCAATTGTTGTTGGAGCTCAAATGCGGTATGAAGTCACGGGTGATCCGCTTTATAAGGAAATTGGGACGTTCTTTATGGACCTTGTAAACTCTTCTCACAGTTATGCAACTGGAGGGACATCAGTCAGTGAATTCTGGAGTAATCCAAAGAGAATAGCAGACAACCTAAAATCAGTTGAGACTGAAGAATCTTGCACAACATATAATATGTTGAAGGTTTCACGGCACCTGTTCAGATGGACCAAGGAAGTCACTTATGCAGATTATTACGAGCGCGCCTTAACGAATGGTGTACTCGGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCTCTAGGTGTTGGGGTTTCCAAAGCTATAACTTACCATCACTGGGGAACACCATTTGATTCTTTCTGGTGCTGCTATGGAACAGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTTGAGGAGGAAGGGAATAGTCCTAGTCTATACATCATTCAGTACATATCAAGTTCATTTAATTGGAAATCTGGGAAAGTTTTGCTCACTCAGACAGTTGTTCCAGCTTCTTCGTCGGACCCGTACCTACGAGTTACGTTTACCTTCTCTCCTAATGAGAAAACTGGTACTTCGTCAACGTTGAACTTTCGTCTACCATCTTGGACTCACGCTGATGGTGCAAAGGCGATATTGAATGCTGAAAGTTTATCTCTTCCAGCTCCAGGGAATTTCTTGTCAATTACACGACAGTGGAGTGCCAGTGACAAGCTGACCCTTCAGTTTCCTATTACCATCAGAACAGAAGCCATAAAAGATGAAAGACCTGAATATGCATCTGTTCAAGCAATTCTTTACGGACCATATCTACTCGCCGGTCATACCACTAGCAATTGGGACATTAAAGCCGGAACCGATTGGATTACTCCGATTCCTTCCAGTTACAATAGTCAACTAGTTTCATTTTCACAAGACTTTCAAAATTCAACTTTTGTTATAACAAACTCAAATCAATCACTCACATTGCAAAAATTACCGGAACCGGGAACCGATATCGCTCTTTATGCTACCTTTAGACTTATCCCAAAAGATGCTAGCAGTAAATCAGTGTTAATAGAACCGTTCCATCTTCCTGGAACGATTATAAGTCACCAAGAACCAGACCAACCTCTTACAGTTGTTGATTCTTCCAAAGGCGGACCTTCTTCTGTATTTCTCGTGGTACCTGGATTAGACGGACGGGACCAAACAATATCTTTACAATCACAAAGCAATAAAGATTGTTACGTGCATAGCGATATGAGCTCTGGTTCAGGAGTTAAGCTAAGCTGCAAGTCTAATTCTGAAGCTGGTTTTAACCAAGCAACAAGCTTTGTTGCTGGGAAAGGATTAAGGCAATACAATCCTATTAGTTTTGTGGCTAAAGGTGGAAACCAGAATTTTCTTTTAGAGCCATTGTTCAACTTCAGGGATGAGCACTATACAGTTTACTTCAACATTCAAGATTGA 2526 0.4129 MKAFVCLLMVLMVCGCAAVIKECTNSPTQSHTLRYELLASKNGTWKKEVMSHYHLTPTDESAWVDLLPRKFLSEEQKNDWAVMYRKIKNMGVFKPPVGFLKEVPLEDVRLLEGSIHAVAQQTNLEYLLMLDVDRLLWSFRKMAGLPTPGTPYGGWEATNVELRGHFVGHYLSASALMWASTKNDSLKGKMTALVAGLSACQEKIGTGYLSAFPPELFDRFEDVKPVWAPYYTIHKILAGLLDQYTIGGNPQALKMVTLMVDYFYNRVMNVISQYTVTRHYQSLNEETGGMNDVLYRLYILTGDSKHLLLAHLFDKPCFLGLLAVQANDISDFHANTHIPIVVGAQMRYEVTGDPLYKEIGTFFMDLVNSSHSYATGGTSVSEFWSNPKRIADNLKSVETEESCTTYNMLKVSRHLFRWTKEVTYADYYERALTNGVLGIQRGTDPGVMIYMLPLGVGVSKAITYHHWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGNSPSLYIIQYISSSFNWKSGKVLLTQTVVPASSSDPYLRVTFTFSPNEKTGTSSTLNFRLPSWTHADGAKAILNAESLSLPAPGNFLSITRQWSASDKLTLQFPITIRTEAIKDERPEYASVQAILYGPYLLAGHTTSNWDIKAGTDWITPIPSSYNSQLVSFSQDFQNSTFVITNSNQSLTLQKLPEPGTDIALYATFRLIPKDASSKSVLIEPFHLPGTIISHQEPDQPLTVVDSSKGGPSSVFLVVPGLDGRDQTISLQSQSNKDCYVHSDMSSGSGVKLSCKSNSEAGFNQATSFVAGKGLRQYNPISFVAKGGNQNFLLEPLFNFRDEHYTVYFNIQD* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2155 841 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Tpr3g2155 841 SUPERFAMILY AbfB domain 740 822 IPR036195 GO:0046373|GO:0046556
Tpr3g2155 841 Pfam Beta-L-arabinofuranosidase, GH127 107 631 IPR012878 -
Tpr3g2155 841 SUPERFAMILY Six-hairpin glycosidases 163 439 IPR008928 GO:0005975
Tpr3g2155 841 PANTHER - 7 840 - -
Tpr3g2155 841 Gene3D - 702 832 - -
Tpr3g2155 841 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2155 Tpr-Chr3 19886686 19899423 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2155 K09955 - gmx:100791803 1384.01