Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2154 ATGAAGGCTTTTGTGTGTTTGTTGATGGCCCTTATGATGTGTGGTTGTGCTGCTGTTACCAAAGAATGCTCAGCCTCAAACATTATGGCTCAATCGCATACGCTTCAGTACGAGCTGTTGGAATCAAAGAATCAGGCATGTGAGACATGGAATAAAGAAGAATTGTCTTCTTATCATGTGACACCAACTGATGAATCAACTTGGGGAGATTTGCTTCCAAGAAAGTTCTTATCAGAAGAACAAAAAAATGATTGGGCTGTTACGTATAGAAAAATTAAGAATATGGGTGTTTTTAAGCCACCTGTTGGATTTCTCAAAGAAGTGCCTCTTGGTGATGTGAAGTTGCTGGAAGGTTCAATTCATGCTGTGGCACAGCAGACTAATTTGGAGTATATGTTGATGTTAGATGTTGATAGGTTGCTTTGGAGCTTCAGGAAAACGGCTGGTTTACCGACTCCTGGTACGCCTTATGGAGGATGGGAGGTGCCTGATATTGAAATCAGAGGACATTTTGTTGGGCATTACTTGAGTGCATCAGCTCTAATGTGGGCCAGCACAAAGAATGATACCCTGAAGGGGAAAATGACGGCTCTTGTTGCTGGTCTGTCGGCCTGTCAGGAGAAAATTGGAACGGGATATCTATCTGCATATCCATCTGAATTTTTCGATCGACTTGAAGATCTTAAACCTGTGTGGGTTCCCTATTACACCCTTCACAAGATCTTGGCCGGCTTGTTAGATCAATATACTGTAGCTGGAAACCCTCAAGCTCTAAAAATGGTGACGTGGATGGTCGATTACTTTTACAACCGAGTGATGAATGTAATATCAAAAAACACTGTTGCTAGACACTATAAAACACTGGATAATGAAGTTGGAGGAATGAATGATGTCCTTTACAGATTATATACCATAACGGGGGATTCAAAGCATGTATTGTTGGCACAACTTTTCGAAAAGCCTTACTTTTTAGGGGTGCTTGCATTACAGGTTGATTATATATCTGATTTTCATGCTAATACACATATACCAGTTGTTGTTGGAGCTCAAATGCGGTATGAAGTCACGGGTGATCCACTTTATAAGGAAATTGGGACGTTCTTTATGGACCTTGTAAACTCTTCTCACAGTTATGCAACTGGAGGGACATCAGTCGGTGAATTCTGGCGTAATCCAGATAGAATAGCAGACAACATTAAATCACCAGAGACTGAAGAATCTTGCACAGCATATAATATGTTGAAGGTTTCACGGAACCTGTTCAGATGGACCAAGGAAGTCACTTATGCAGATTATTATGAGCGTGCCATAACGAATGGTGTACTCAGCATTCAAAGAGGAACAGAACCTGGGGTGATGATTTATATGCTTCCTCTAGGTATTGGGGTTTCCAAAGCTATAAGTTTCCATGGTTGGGGAAAACCATTTGATACTTTCTGGTGCTGCTACGGAACAGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGCAAGGGAATAGTCCTAGTCTATACATCATTCAGTACATATCAAGCTCATTTAATTGGAAAACTGGAAAAGTTTTGCTCACTCAGACAGTTGTTCCATCTTCTTCATCGGACCCTTACCTGCGAGTTACATTTACCTTCTCTCCTATTGAGCAAACTGGTATTTCGTCATCATTGAAATTTCGTGTACCATCTTGGACTCGCGCTGACGGTGCAAAGGCGATATTGAATGCTGAAACTTTATCTCTGCCAGCTCCAGGGAATTTCTTGTCAATCACACGACAGTGGAGTACCGGTGACAAGCTGACCCTTGAGTTTCCTCTTACCATCAGAACAGAAGCCATAAAAGATGACAGACCTGAATATGCATCTGTTCAAGCAATTCTTTACGGACCATATCTTCTAGCCGGTCATTCCACCAACAATTGGGATTGGGACATTAAAGCCGGAACCGATTGGATTACTCCGATTCCTTCCAGTTACAATAGTCAACTAGTTTCATTTTCACAAGACTTTCAAAATTCAACTTTTGTTATAACAAACTCAAACCAATCACTCACAATGCAAAACTTACCTGCACCTGGAACCGATATCGCTCGTTATGCTACTTTTAGACTTATCCCAAAAGATGCTACCAATAAATTAGTGATGATAGAACCGTTCCATCTTCCTGGAACGATTATAAGTCACCAAGAACCAAACCAACCTCTTACCGTTGTTGATTCTTCCAAAGCCGGGCCTTCTTCTGTATTTCTAGTGGTACCAGGATTAGACGGACGAAATCAAACAATATCTTTACAATCACAAAGCAATAAAGATTGTTACGTGCATAGCGATATGACCTCTGGTTCGGCAGTTAAGCTAAGCTGCAAGTCCAATTCTGAAGCTAGTTTTAACCAAGCAACAAGCTTTGTTTCTGGGAAAGGATTAAGGCAATACAATCCTATCAGCTTTGTGGCTAAAGGTGCAAACCAGAATTTTCTTTTAGAGCCATTGTTCAACTTCAGGGATGAGCAATATACAGTTTATTTCAAAATGGCGACACCCATTAATTTGCCTAGCAATTCAGTAGCCAAGGCATGA 2583 0.4084 MKAFVCLLMALMMCGCAAVTKECSASNIMAQSHTLQYELLESKNQACETWNKEELSSYHVTPTDESTWGDLLPRKFLSEEQKNDWAVTYRKIKNMGVFKPPVGFLKEVPLGDVKLLEGSIHAVAQQTNLEYMLMLDVDRLLWSFRKTAGLPTPGTPYGGWEVPDIEIRGHFVGHYLSASALMWASTKNDTLKGKMTALVAGLSACQEKIGTGYLSAYPSEFFDRLEDLKPVWVPYYTLHKILAGLLDQYTVAGNPQALKMVTWMVDYFYNRVMNVISKNTVARHYKTLDNEVGGMNDVLYRLYTITGDSKHVLLAQLFEKPYFLGVLALQVDYISDFHANTHIPVVVGAQMRYEVTGDPLYKEIGTFFMDLVNSSHSYATGGTSVGEFWRNPDRIADNIKSPETEESCTAYNMLKVSRNLFRWTKEVTYADYYERAITNGVLSIQRGTEPGVMIYMLPLGIGVSKAISFHGWGKPFDTFWCCYGTGIESFSKLGDSIYFEEQGNSPSLYIIQYISSSFNWKTGKVLLTQTVVPSSSSDPYLRVTFTFSPIEQTGISSSLKFRVPSWTRADGAKAILNAETLSLPAPGNFLSITRQWSTGDKLTLEFPLTIRTEAIKDDRPEYASVQAILYGPYLLAGHSTNNWDWDIKAGTDWITPIPSSYNSQLVSFSQDFQNSTFVITNSNQSLTMQNLPAPGTDIARYATFRLIPKDATNKLVMIEPFHLPGTIISHQEPNQPLTVVDSSKAGPSSVFLVVPGLDGRNQTISLQSQSNKDCYVHSDMTSGSAVKLSCKSNSEASFNQATSFVSGKGLRQYNPISFVAKGANQNFLLEPLFNFRDEQYTVYFKMATPINLPSNSVAKA* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2154 860 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Tpr3g2154 860 PANTHER - 8 846 - -
Tpr3g2154 860 SUPERFAMILY AbfB domain 747 829 IPR036195 GO:0046373|GO:0046556
Tpr3g2154 860 SUPERFAMILY Six-hairpin glycosidases 169 443 IPR008928 GO:0005975
Tpr3g2154 860 Pfam Beta-L-arabinofuranosidase, GH127 112 636 IPR012878 -
Tpr3g2154 860 Gene3D - 708 840 - -
Tpr3g2154 860 PANTHER PROLINE-TRNA LIGASE (DUF1680) 8 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2154 Tpr-Chr3 19877387 19883081 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2154 K09955 - gmx:100781521 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2154 3 19877387 19883081 Tpr3g2154 3 19877387 19883081 ECH