LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr3g2133	ATGGCATATCTTCTCCAATTAAACTTTCCCACCCCTATCTCTTCCTACACCACCATCCCTAAAACCCCAAACCGCATTTTCTCCTTTCACCACACTCTTCCTTTTTCCACTTCAATTCTTTCCTCTCTTTCTCAACCTAAATCATCCATTTCTCTCCCTCGCCGGAGCCTCTCCCTCTCCATACCGCAATTCAGCGCCACTGAATTATCCGGCACCACTGCCGATGATGACGACGATGAGCTATTATTACCAGATGAATTGGACAACGAAGTTGATTATTCAGATGAAGATGATGACGTTGATGTCGTTGCGCTCGAGCGAGAAGCAAAGGAAGTTGCGCTGGAGTATTCAACCTCTCTATCTCGCGTTTTAACTATTGAAGAAGAGAGAAGTAATGTAAAGGAAACGGGGAAAAACTCCAAGAGGAGTAAACCGAAGAAAAAAATTATCCCCGACAATCTTCTCCCAAGGATTGCTATTGTTGGAAGACCGAACGTTGGCAAGTCAGCATTATTTAATCGTCTCGTTGGGGGAAACAAGGCTATCGTGGTGGATGAACCTGGGGTTACTAGGGATCGTTTATATGGCCGATCATATTGGGGAGATCATGAATTCATGGTGGTGGATACTGGTGGTGTTATCACTGTTTCAAAATCACAAAGTACTGTTATGGAGGAGCTGGATATTAGTACAACTATTGGTATGGATGGTATTCCCCTTGCCTCTAGAGAGGCTGCTGTTGCCAGGATGCCATCAATGATTGAGAAACAAGCGATTGCAGCTGTGGAAGAATCACCTGTTATTATTTTCCTGGTTGATGGTCAGGCAGGTCTAACAGCAGCTGATGTGGAGATTGCTGATTGGCTACGTAGAAACTACTCAAATAAAAGCATCATTCTTGCAGTTAACAAGTGTGAATCTCCACGGAAAAGAATTATGCAGGTGTCTGAATTTTGGTCCCTTGGGTTTGAACCAATTCCAATATCAGCTATATCAGGGTCTGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCAGGGATTCAGAAAGTTGAGGAGCCAAATAATATTCTTGAAGAAGAAGATTATGTTCCTGCGATTTCAATTGTTGGTAGACCAAATGTGGGCAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGACAGAACAATAGTCAGCCCAATCAGTGGCACTACACGTGATGCTATTGATACTGAATTTACTGCACCAGATGGCCAGAAGTTCCATCTTATTGATACTGCTGGAATCAGGAAAAGGACAGCCGTAGCCTCAGCTGGAAGCACAACAGAGGCTTTGTCGGTGAATCGAGCATTTCGTGCTATTCGGCGTTCTGATGTTGTTGCGCTTGTCATTGAGGCCATGGCTTGTATCACTGAACAGGACTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATCGTTGTAAACAAATGGGATACAATACCAAATAAAAATCAGCAGACTGCATTATTCTATGAGCAAGATGTCAGAGAGAAGCTTCGTTTACTTAACTGGGCTCCAATTGTTTATTCTACTGCTCTAGCTGGCCAAAGTGTTGACAAGATCATTGTTGCTGCTAGTGAAGTCGAAAAGGAGAGATCAAGAAGACTGGGTACTTCTATATTAAATCAAGTAGTAGGGGAAGCAGTAACTTTTAAGCCTCCTCCCAGGACACGCGGTGGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCTATAAGACCGCCTACATTTGTGTTCTTTGTCAATGATGCAAAACTTTTTCCTGAAACTTACCGGCGCTTTATGGAGAAGCAGCTGCGTTCAAATGCAGGATTTCCTGGTACTCCCATTCGGCTTCTGTGGCGCAGCAGAAAAAAAATGGAAAAAGATGAAGGAAAAAAGGTTACAAGGACCAAAGAAAATCGTGCGCCGCACCGTCGAAAATTGATCTCAGCTACAAAGTAG	1980	0.4348	MAYLLQLNFPTPISSYTTIPKTPNRIFSFHHTLPFSTSILSSLSQPKSSISLPRRSLSLSIPQFSATELSGTTADDDDDELLLPDELDNEVDYSDEDDDVDVVALEREAKEVALEYSTSLSRVLTIEEERSNVKETGKNSKRSKPKKKIIPDNLLPRIAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDHEFMVVDTGGVITVSKSQSTVMEELDISTTIGMDGIPLASREAAVARMPSMIEKQAIAAVEESPVIIFLVDGQAGLTAADVEIADWLRRNYSNKSIILAVNKCESPRKRIMQVSEFWSLGFEPIPISAISGSGTGELLDLVCSGIQKVEEPNNILEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTAPDGQKFHLIDTAGIRKRTAVASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTALFYEQDVREKLRLLNWAPIVYSTALAGQSVDKIIVAASEVEKERSRRLGTSILNQVVGEAVTFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRFMEKQLRSNAGFPGTPIRLLWRSRKKMEKDEGKKVTRTKENRAPHRRKLISATK*	660

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr3g2133	659	TIGRFAM	GTPase_EngA: ribosome-associated GTPase EngA	249	626	IPR016484	GO:0005525
	Tpr3g2133	659	MobiDBLite	consensus disorder prediction	631	659	-	-
	Tpr3g2133	659	CDD	EngA2	366	539	-	-
	Tpr3g2133	659	Gene3D	-	360	544	IPR027417	-
	Tpr3g2133	659	Hamap	GTPase Der [der].	155	630	IPR016484	GO:0005525
	Tpr3g2133	659	TIGRFAM	small_GTP: small GTP-binding protein domain	364	533	IPR005225	GO:0005525
	Tpr3g2133	659	CDD	EngA1	159	347	-	-
	Tpr3g2133	659	Pfam	50S ribosome-binding GTPase	366	487	IPR006073	GO:0005525
	Tpr3g2133	659	Pfam	50S ribosome-binding GTPase	157	304	IPR006073	GO:0005525
	Tpr3g2133	659	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	156	345	IPR027417	-
	Tpr3g2133	659	PRINTS	GTP1/OBG GTP-binding protein family signature	366	386	IPR006073	GO:0005525
	Tpr3g2133	659	PRINTS	GTP1/OBG GTP-binding protein family signature	440	458	IPR006073	GO:0005525
	Tpr3g2133	659	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	324	634	IPR027417	-
	Tpr3g2133	659	Gene3D	-	153	356	IPR027417	-
	Tpr3g2133	659	PANTHER	GTPASE DER	139	637	-	-
	Tpr3g2133	659	Gene3D	-	546	630	IPR015946	-
	Tpr3g2133	659	Pfam	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal	546	627	IPR032859	-
	Tpr3g2133	659	PANTHER	GTP-BINDING PROTEIN	139	637	-	-
	Tpr3g2133	659	ProSiteProfiles	EngA-type guanine nucleotide-binding (G) domain profile.	364	544	IPR031166	GO:0005525

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr3g2133	Tpr-Chr3	19645941	19652323	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr3g2133	-		-	gmx:100777588	960.288

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr3g2133	3	19645941	19652323	Tpr3g2133	3	19645941	19652323	ECH