Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2121 ATGTCGTTAGTACCTATGAACGAGGATCAACGCGTCAACAATTCATTAGATACAAATCCCCTATCTCTATGGGATCCAGTCATGAATTTTCACTTCCCACTCCCTTCACCCATTTCCAGTTTGTTCCCTGAATTCAACTTCGGATCATCCCTAAACACTCGTCTTGATTGGAGAGAAACACCCAGATCCCACGTTTGGAAGATTGTGCTTCCTGGTTTCACCAACGAAGATGTGTTGGTTGAACTTCAAGAGGAAAGGATGTTGCAGGTTAGTGTTGAAAGTGGTAATTTCATGAGTAGGTTCAAGATTCCTGATGATGGTAATCTTCAAGAGCTTAAAGCTAATATGATTAATGGTGTTCTTGTTGTTACTGTTCCAAAGCTTCAACAATGTTCTGGTTCTGCTGGGAGGAATATTAGGGTTGTTGAAATTGAGGGCAGTGACTGA 447 0.4139 MSLVPMNEDQRVNNSLDTNPLSLWDPVMNFHFPLPSPISSLFPEFNFGSSLNTRLDWRETPRSHVWKIVLPGFTNEDVLVELQEERMLQVSVESGNFMSRFKIPDDGNLQELKANMINGVLVVTVPKLQQCSGSAGRNIRVVEIEGSD* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2121 148 Pfam Hsp20/alpha crystallin family 57 141 IPR002068 -
Tpr3g2121 148 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 147 - -
Tpr3g2121 148 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 147 - -
Tpr3g2121 148 SUPERFAMILY HSP20-like chaperones 37 130 IPR008978 -
Tpr3g2121 148 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 46 145 IPR002068 -
Tpr3g2121 148 Gene3D - 20 142 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2121 Tpr-Chr3 19516980 19517851 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2121 K13993 - gmx:100797426 180.644