Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2120 ATGTATCACAAACCTACTACCAAAACATTGATGGAAAATCAAATTAGGCACCATTTAGTTCTAATCCCACCACCATTTCATGGTCACCTAACTCCTATGCTTCAATTAGCCTCAATCCTTCATTCAAAAGGTTTCTCCATCACCATAGCACACACCTATTTCAATTCCCCTAATCCTTCTAATTATCCTAATTTCAATTTTCTACCTTACTTTGATGGTTTATCTAATACCCAAATCACATCCAAGAATTTTATAGATATTACTTCAACTCTAAATACCAAGTGTGAATCTCCACTTAAGGAGACATTAGTTCATTATATTGCAAAATTAGCAAATCAAAAGCATGAAAAAATTGCTTGCATCATTTATGATGGATTGTTGCACTTCATAGATTCTGTGGCAAAGGAATTAAAGATACCAAGCATAGTCTTTAGAACCACTAGTGCTACTAATTTCCTCACTTATCATGCATGTGCTCAGCTACAAAGCAAAGGTTACCTTCCCTTGCAAGATTCTAAGTCATGTGACTTGGTACCAGAATTGGACTTGCTGCGATTCAAAGATCTGCCAATTTTCAATTTACCAAATCCAGATGATTTTCTACAAAACTCAGCTAAAACACTTTCAATAACACCTTTCGGTGTTATATTCAATACTGTGGATAGCTTAGAAGATTCATCACTAAATCAACTCCAACAGTTATACAAAGTTAACATATTCCCCATAGGCCCTCTACACATGATTGCAGATGATTCCAACAATAGTAAAAGCATTCTGCGCGAAAATCATAATTGCATTTCATGGCTAAACAACAAAGCTAGAAAATCTGTGTTATATGTAAGTTTGGGAAGTATAGCTAGTTGGGAAGAGAAAGAGCTAACTGAAGTAGCTTGCGGCTTAGCGAATAGCAAACAAAATTTCCTTTGGGTTATTAGACCGGAGACAGTTAAGGATGTTTCGGCGTGGTTACAATCATTGTCAGAGGATGTTAAAGTAGGTATAGCGGAGAGGGGATGTGTCGTGAAATGGGCACCTCAAGGTGAAGTCTTGGCACATGAAGCTGTTGGTGGGTTTTGGAGTCATTGTGGTTGGAATTCTACATTGGAGAGTTTGTGTGAAGGAGTACCGATTATTTGTCAACCTTCTTTTGGAGATCAGAGGGTGAATACTAGATTGTTAAGTCATGTTTGGAAGGTGGGTTTGGAATGGTGTAATGTGATATTAAGGGATGAGATTGAAAGGGTTGTGAGAAGACTTATGGTGAATCAAGAAGGGGAGGAAATGAGACAGAGAGCAAGTGAATTGAAGCATGAGATTAGGCTAGCTGTGAATGGTTCTTCCTGTGATGCATTGGATGGATTGGTTAAGTGTATCTTATCAGTGAATGTCTGA 1392 0.3772 MYHKPTTKTLMENQIRHHLVLIPPPFHGHLTPMLQLASILHSKGFSITIAHTYFNSPNPSNYPNFNFLPYFDGLSNTQITSKNFIDITSTLNTKCESPLKETLVHYIAKLANQKHEKIACIIYDGLLHFIDSVAKELKIPSIVFRTTSATNFLTYHACAQLQSKGYLPLQDSKSCDLVPELDLLRFKDLPIFNLPNPDDFLQNSAKTLSITPFGVIFNTVDSLEDSSLNQLQQLYKVNIFPIGPLHMIADDSNNSKSILRENHNCISWLNNKARKSVLYVSLGSIASWEEKELTEVACGLANSKQNFLWVIRPETVKDVSAWLQSLSEDVKVGIAERGCVVKWAPQGEVLAHEAVGGFWSHCGWNSTLESLCEGVPIICQPSFGDQRVNTRLLSHVWKVGLEWCNVILRDEIERVVRRLMVNQEGEEMRQRASELKHEIRLAVNGSSCDALDGLVKCILSVNV* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2120 463 PANTHER UDP-GLYCOSYLTRANSFERASE 76E5 15 459 - -
Tpr3g2120 463 Gene3D Glycogen Phosphorylase B; 18 455 - -
Tpr3g2120 463 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 17 459 - -
Tpr3g2120 463 Gene3D Glycogen Phosphorylase B; 263 442 - -
Tpr3g2120 463 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 87 429 IPR002213 GO:0008194
Tpr3g2120 463 CDD GT1_Gtf-like 18 442 IPR002213 GO:0008194
Tpr3g2120 463 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 15 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2120 Tpr-Chr3 19512947 19516692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2120 10 455 Glycosyltransferase AT3G46670 44.150 6.25e-125 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2120 - - gmx:100786860 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2120 3 19512947 19516692 Tpr3g2120 3 19512947 19516692 ECH