Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2115 ATGGCGAGTGATAGGAAAATTGGGGTAGCTTTAGATTTTTCCAATGGAAGCAAGATCGCTCTCAAATGGGCTATTGATAATCTTCTCCGCCACGGTGATACTCTTTATATTGTTCATGTCAATCATTCCAAAGCCACTGAATCTCGTAATCTTCTATGGGCAACCACTGGTTCTCCTTTGATTCCGATTTCGGAGTTTCGTGAGAAGAACGTGCAGCACCAGTATGAGGTGGAACCTGATGTTGAGGTTTTGGACATACTTGACACAGTTTCTAAACAGAAACAGGTGCCTGTGGTGGGGAAGATATATTGGGGGGATGCAAGAGAGAAAATTGTTGATGCTGTTGGGGATTTGAAGCTTGATGCTTTGGTTTTGGGTAGTAGAGGTTTGGGTGCCATAAAAAGGGTATTGTTGGGGAGTGTATCTACTTTCGTAACTTCAAATGCAAGTTGCCCTGTAACAATTGTGAAAGAAGATGTCCCTTCTACCATCTGA 495 0.4283 MASDRKIGVALDFSNGSKIALKWAIDNLLRHGDTLYIVHVNHSKATESRNLLWATTGSPLIPISEFREKNVQHQYEVEPDVEVLDILDTVSKQKQVPVVGKIYWGDAREKIVDAVGDLKLDALVLGSRGLGAIKRVLLGSVSTFVTSNASCPVTIVKEDVPSTI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2115 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Tpr3g2115 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Tpr3g2115 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Tpr3g2115 164 CDD USP_Like 6 156 - -
Tpr3g2115 164 Pfam Universal stress protein family 5 157 IPR006016 -
Tpr3g2115 164 Gene3D HUPs 2 163 IPR014729 -
Tpr3g2115 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE SUPERFAMILY PROTEIN 1 161 - -
Tpr3g2115 164 PANTHER IMP2'P 1 161 - -
Tpr3g2115 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2115 Tpr-Chr3 19468757 19472391 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2115 - - ccaj:109790326 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2115 3 19468757 19472391 Tpr3g2115 3 19468757 19472391 ECH