Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2106 ATGAGAGAGAACAAAATGCATCATCAAGCTTGTCACTGTTCTGTCCCAAATCCAACATCTACTCTCCCACTCTACTCAAACGCCAACGGTTCCACTTCCCGTTCTCCAACAATCACCTCTTTCAACCTTATAAAACCATCAAAAACCACTCGGATTCGAAACCAAACCATGTTGCATTCCCACACCCAAACACACCATAAATGGTCTCTTACCGGTATGACAGCTCTTGTCACAGGTGGAACTCGCGGAATTGGGCATGCCATTGTTGAGGAATTGATAGGGTTTGGTGCCAAAGTGCATACTTGTGCTAGAAATGAAGATGATCTTGGTAATTGTCTCAAGGAATGGAATCATCTGGGTTTTGAGGTTACTGGCTCAATTTGTGACGTGTCAGTTCCACATCAGAGGGAGGTGCTTATGGAGGATGTTTCTTCTCTCTTCAATGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTCGGAAACCAATGATAGACTTCACACCAGCAGAGTTTTCCACTCTCATTGATACCAATTTAGGATCAACCTTTCATATGTGCCAGCTTGCATATCCACTTCTCAAAGCATCAGGAGTTGGTAGTGTTGTTTTTATCTCTTCTGTTTCTGGTTTTGTCTCACTGAAGTCAATGTCTGTTCAAGGAGCAACAAAAGGGGCAATTAATCAACTTACAAAAAATCTTGCTTGTGAGTGGGCAAAAGACAACATAAGGACTAATGCAGTTGCACCTTGGTACATCAGAACTTCGATGGTCGAGCAAGTTTTGAGCAACAAAGAATATCTGGAAGAGGTGTACTCTCGAACTCCTCTAAGACGCCTAGGAGATCCGGCAGAAGTGTCTTCTCTTGTTGCCTTTCTTTGCTTACCAGCATCGTCATACATCACTGGCCAGATTATATGTGTTGATGGAGGAATGTCCGTGAATGGTTTCTCTCCAACACAGATCTAA 975 0.4277 MRENKMHHQACHCSVPNPTSTLPLYSNANGSTSRSPTITSFNLIKPSKTTRIRNQTMLHSHTQTHHKWSLTGMTALVTGGTRGIGHAIVEELIGFGAKVHTCARNEDDLGNCLKEWNHLGFEVTGSICDVSVPHQREVLMEDVSSLFNGKLNILINNVGTNIRKPMIDFTPAEFSTLIDTNLGSTFHMCQLAYPLLKASGVGSVVFISSVSGFVSLKSMSVQGATKGAINQLTKNLACEWAKDNIRTNAVAPWYIRTSMVEQVLSNKEYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICVDGGMSVNGFSPTQI* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2106 324 Pfam Enoyl-(Acyl carrier protein) reductase 81 315 - -
Tpr3g2106 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 160 IPR002347 -
Tpr3g2106 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 202 210 IPR002347 -
Tpr3g2106 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 222 241 IPR002347 -
Tpr3g2106 324 PRINTS Glucose/ribitol dehydrogenase family signature 74 91 IPR002347 -
Tpr3g2106 324 PRINTS Glucose/ribitol dehydrogenase family signature 149 160 IPR002347 -
Tpr3g2106 324 PRINTS Glucose/ribitol dehydrogenase family signature 196 212 IPR002347 -
Tpr3g2106 324 PRINTS Glucose/ribitol dehydrogenase family signature 222 241 IPR002347 -
Tpr3g2106 324 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Tpr3g2106 324 PRINTS Glucose/ribitol dehydrogenase family signature 278 298 IPR002347 -
Tpr3g2106 324 Gene3D - 63 318 - -
Tpr3g2106 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 72 316 IPR036291 -
Tpr3g2106 324 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 44 323 - -
Tpr3g2106 324 PANTHER TROPINONE REDUCTASE 44 323 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2106 Tpr-Chr3 19418757 19422130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2106 67 320 Miscellaneous Gene Families AT2G29290 63.386 5.61e-117 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2106 K08081 - gmx:100799534 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2106 3 19418757 19422130 Tpr3g2106 3 19418757 19422130 ECH