Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2104 ATGGTTCCCACTCTTTCATCCAATTCTTCTCTATTTCCAACCACACCACATTTAAAGTTGAATTTCAGAAACCAAACAAGGTTCAATGTTTATGCTAAGAAATCTGGTGGAGGATCATTTCCATCATTTGGATTAGGAAAACCCAAAGATGAAGAAAAAGATCAAACAAATGGTTCATCATCAAATTCTAATAACCCTTTTGGTTTTGACTTTGGAAAATTACCTGATGTCACTTCTTTGATACCTGTTGGGAGCAAAAACTCTTCTTTGCCAGGTTTGTCATTTGGAAGTCCTAGGAGGAAGGATTCTTCGACGGTTTTTGTTGCCGGTGCTACAGGTCAAGCTGGTATTCGCATTGCTCAAACTTTGCTTAGGGAAGGGTTTAGTGTTAGAGCTGGTGTTCCTGAACTTGGTTCTGCTCAGGAATTGGCTCAACTTGCTTCTCAATATAAGATTATATCAAATGAAGAGGCAAAGCGTCTCAATGCCGTGGAGTCAAGCTTTGTTGATGCAAATTCAATAGCAAAAGCAATAGGCAATGCAAGCAAAGTGGTTGTCACCATTGGTCCCACAGAGAACGGTCCAACGGCTGCGGTTTCCACTTCAGATGCCTTGCAAGTAATTCTGGCGGCTCAGCTGGCAGGCGTGGGCCATGTTGCAGTCATCTACGACGATGACAAAAATGGAGCCGGAACCTCAACCAACAATGTACTTGATGGCATCTCCTCTTTCTTCAACAATCTCTTCTCTAAGTCTCAACCTTTAACGATTCAAGAGTTCTTGCAGAAAGTTGTTGAAACAGATGTCAAATATACCTTAATCAAGACATCTTTGACGGACGATTTCTCACCAGAGAGTTCTTATAATGTGGTCGTCTTAGCTGAAGGAAGCACCGGTTCAAACGACTATAAAGTAACTAAGTCCAAGATAGCATCGTTGGTCTCTGATGTCTTCTCCAACACACAGGTTGCAGAAAACAAGGTTGTGCAAGTGTACTCGGACCCGAGTGCTCCCCTAAAGCGTGTAGACGAACTTTTCAGCACTATTCCAGAAGATGGCAGAAGGAAAGTCTATGCTGAAAATTTGGAGAAAGCCAAAGCAGAGGAAGAGGTAAGAGTGGCAGCAGAAAATGCACGCGAAGAAGCTGAAACAGCAAAAAAGAACGAAGAAGAGGTAATAAAGCTTTCAAAGCAAGGAGCGCAGGCTTCTAATAAAGAAGCTAAAGAGAAAGCAGAAGCAGCTGGACCATCAGTGGATGACATCTTGAACAAGGCAAAAGATTTTAGTGCAGGGTTTTCATGGCAAAAGTTCAGCTCACAGGTTGCCACCTCAATTCAAAAGCCTGATGAGGATGAGGAACCGAAGGTGAAAGTGGCCACTGTGAGGGGACAGGCGAAAGCTCGGAGTCTCATTCCGAACAAAGCAGTGACTAAACAAACAACTCCAAAAAGCAGTGAGAGGAAACCAAAGGAGGAAAAAGTAAAGGTAGCAGAGAAACCAAAAGAGGTTAGGAAGGTATTTGGTGGTCTGTTTAAGCAAGAGACTATCTATGTTGATGATGACTAG 1566 0.4285 MVPTLSSNSSLFPTTPHLKLNFRNQTRFNVYAKKSGGGSFPSFGLGKPKDEEKDQTNGSSSNSNNPFGFDFGKLPDVTSLIPVGSKNSSLPGLSFGSPRRKDSSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELGSAQELAQLASQYKIISNEEAKRLNAVESSFVDANSIAKAIGNASKVVVTIGPTENGPTAAVSTSDALQVILAAQLAGVGHVAVIYDDDKNGAGTSTNNVLDGISSFFNNLFSKSQPLTIQEFLQKVVETDVKYTLIKTSLTDDFSPESSYNVVVLAEGSTGSNDYKVTKSKIASLVSDVFSNTQVAENKVVQVYSDPSAPLKRVDELFSTIPEDGRRKVYAENLEKAKAEEEVRVAAENAREEAETAKKNEEEVIKLSKQGAQASNKEAKEKAEAAGPSVDDILNKAKDFSAGFSWQKFSSQVATSIQKPDEDEEPKVKVATVRGQAKARSLIPNKAVTKQTTPKSSERKPKEEKVKVAEKPKEVRKVFGGLFKQETIYVDDD* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2104 521 MobiDBLite consensus disorder prediction 445 497 - -
Tpr3g2104 521 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 104 222 IPR036291 -
Tpr3g2104 521 Coils Coil 359 395 - -
Tpr3g2104 521 MobiDBLite consensus disorder prediction 41 67 - -
Tpr3g2104 521 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 521 - -
Tpr3g2104 521 Gene3D - 93 337 - -
Tpr3g2104 521 MobiDBLite consensus disorder prediction 377 415 - -
Tpr3g2104 521 MobiDBLite consensus disorder prediction 481 497 - -
Tpr3g2104 521 MobiDBLite consensus disorder prediction 377 394 - -
Tpr3g2104 521 Pfam NAD(P)H-binding 110 320 IPR016040 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2104 - - mtr:MTR_4g064750 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2104 3 19403069 19406293 Tpr3g2104 3 19403069 19406293 ECH