Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2102 ATGGCATCATCATCAACACTGTCTTATTCTTGTTTTCCTCAAATGGCATCATCATCAACACCTCTCATCAATTTCAAACTTTCTCTATTCAACTCACTTCACCATCAAAGAACAATAAACAACTCAAAAACTACCATCAATCCGCGCCTCATTTCTTCTTCCATTAACAATCATTTGTCGACAACACGTGTCACTTATCCACTTCTTACATCTCACCCTCTTCATAACCGTAGATTCAACGTTCGATTTCAAGCACAGAAGGAGTATTCTGCTGGGAACAGTTCTGAGTCAGTTGCTTCTGATGCAACTTCCCAAGAGGAATTTTCTTGGTCTTCTGTAATTCTTCCGTTTGTGTTCCCTGCATTGGGTGGCTTGTTATTCGGTTACGATATTGGTGCCACATCCGGTGCTACAATTTCACTGCAGTCACCTGAGCTTAGCGGTATCGCTTGGTCCAATCTTTCTTCCATTCAGCTTGGTCTTGTGGTCAGTGGTTCTCTATACGGGGCTCTTTTTGGCTCACTTCTTGCATTTGCAATTGCTGACTTCATTGGGAGGAAGCGACAACTCATCGGTGCAGCCCTTTTGTATCTACTTGGTAGTGCAATCACTGCCACTGCTCCAGAACTTGGTGTTCTCTTAGCAGGAAGGCTGATTTATGGACTTGGTATAGGTCTGGCCATGCATGGAGCTCCTTTATACATTGCAGAAACTTGTCCGTCACAAATCCGTGGGACTCTAGTATCATTAAAAGAACTCTTCATTGTCTTGGGGATTCTGGTGGGTTATTTTGTGGGAAGCTTTCAGATTAGTACAGTTGGTGGATGGCGATTCATGTATGGATTCAGTGCTCCGCTTGCTGTGTTAATGGGGCTCGGAATGTGGACTCTCCCCGCCTCTCCTCGGTGGTTGCTTCTCAAAGCAGTACAAGGAAAAGGTTCTTTTCAAGATTTGAAGGAGAAGGCAATCGTTTCCCTTAGCAAATTAAGAGGCCGACCACCTGGCGACAAAGAATCCGAGAAGCAGATAGAAGAGAGTCTTGTCTCATTGAAGTCTGCCTATGCGGATCAGGAATCCGAGGCGAATTTCTTAGAGGTGTTTCAGGGTCCAAATCTGAAAGCATTCATAATTGGTGGGGGGCTAGTATTATTTCAACAGATAACAGGTCAACCTAGTGTTCTGTATTATGCAGGTCCTATTCTTCAGAGTGCTGGATTTTCTGCTGCAGCCGACGCAGCTAAAGTTTCAGTTGTTATTGGCTTATTCAAGCTAGTAATGACATCGGTTGCTGTCCTAAAAGTAGATGATTTGGGGAGAAGACCTTTGCTGATTGGAGGTGTCAGTGGCATTGCCCTATCTTTAGTTCTCCTTTCTGCCTATTATAAATTTCTCGGAGGGTTACCGATTGTGGCTGTTGGGGCATTACTTCTTTACGTTGGTTGCTACCAGATATCATTTGGGCCGATAAGTTGGCTTATGGTGTCAGAAATTTTCCCACTTCGCACTAGAGGACGGGGGATTAGTATGGCTGTTCTTACCAACTTCGCTTCAAATGCCGTTGTTACCTTTGCATTCTCACCATTGAAGGAGTATCTAGGAGCAGAGAACCTTTTTCTCCTTTTTGCAGCCATTGCTTTAGTGTCACTTGTGTTCATCATAACTTCTGTCCCGGAGACAAAAGGCTTGAGCTTAGAAGATATTGAATCCAAAATCTTGAAGTGA 1722 0.439 MASSSTLSYSCFPQMASSSTPLINFKLSLFNSLHHQRTINNSKTTINPRLISSSINNHLSTTRVTYPLLTSHPLHNRRFNVRFQAQKEYSAGNSSESVASDATSQEEFSWSSVILPFVFPALGGLLFGYDIGATSGATISLQSPELSGIAWSNLSSIQLGLVVSGSLYGALFGSLLAFAIADFIGRKRQLIGAALLYLLGSAITATAPELGVLLAGRLIYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILVGYFVGSFQISTVGGWRFMYGFSAPLAVLMGLGMWTLPASPRWLLLKAVQGKGSFQDLKEKAIVSLSKLRGRPPGDKESEKQIEESLVSLKSAYADQESEANFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADAAKVSVVIGLFKLVMTSVAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGLPIVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISMAVLTNFASNAVVTFAFSPLKEYLGAENLFLLFAAIALVSLVFIITSVPETKGLSLEDIESKILK* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2102 573 Pfam Sugar (and other) transporter 119 568 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr3g2102 573 ProSitePatterns Sugar transport proteins signature 2. 219 244 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr3g2102 573 Gene3D MFS general substrate transporter like domains 107 571 IPR036259 -
Tpr3g2102 573 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 56 573 - -
Tpr3g2102 573 ProSitePatterns Sugar transport proteins signature 1. 177 194 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr3g2102 573 PRINTS Sugar transporter signature 124 134 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2102 573 PRINTS Sugar transporter signature 214 233 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2102 573 PRINTS Sugar transporter signature 385 395 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2102 573 PRINTS Sugar transporter signature 472 493 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2102 573 PRINTS Sugar transporter signature 495 507 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2102 573 TIGRFAM SP: MFS transporter, sugar porter (SP) family 109 567 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2102 573 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 56 573 - -
Tpr3g2102 573 CDD MFS_GLUT10_12_Class3_like 119 567 - -
Tpr3g2102 573 ProSiteProfiles Major facilitator superfamily (MFS) profile. 116 560 IPR020846 GO:0022857
Tpr3g2102 573 SUPERFAMILY MFS general substrate transporter 105 568 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2102 Tpr-Chr3 19376322 19381433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2102 31 573 Organic Solute Cotransporters AT5G59250 72.495 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2102 - - gmx:100809316 901.353