Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2101 ATGGCTCAACTCGAACGTCCTCAAAGTCAGAGATATGTTGATGGTTCAAAAAATCCTGCTACCATCCAAACCATGGAACAACTCCTCAGAGGAGAAGCCTCAAAGTCATCAAAGTCAAAGTTGTCACCGAGCAAATCCTCCTCTTCCTCAGCCTGTTCTTCCCCATCCTCTCCTTTCTTCCAGAGGTTGAGGCACCATGACACAGAAGAAGACCATGGCCAGAATCAGAAGAAATCAGTTATGACCAAAGTGAAGGAAAAAGCCAAGAAGTTACGCCACAGCCTCAGCAAGAAAAGACACGAGGACTGGAATCCTATTAGTCCCTCTTCAGGTTCTGGGCAAGAAGGCGATGGAGCAGAAGAAGATGCTGAATGTCGTGGAGCTCCAATGTATGAATCCGAGAAGGCGCCTGAAGGATACAACGGATATGTAAGACAGCATTCAAGAATGAGTCCAAAATCCCCACAGAAGCATGTTCTGTCAAATAATGAGAAACTTGGGTTAGAACAAGCTAGAGAAAAGACACTAAATCGTTCGCTGTCGAAGAAAACAACACAACCAGCTGCAGCTCCTGCTGCTACAGCTGCTACTACACCCTCTGGTCCAAGCAAGATACTGACCAAACCCGTAGCCGAGAAGAATCTGACACCAGCATATGCTGAAGGATCAGAAACAGCTCAGTATATAACCTCGAAATTTCAAGGTCTCTCAGTTTCCAAACCTGGAGAGCACCACAGTTCATCAACAACAGCTGCAACAACTCATAAACCTTCGTCGTTGACCATTCGTGCTTCACGTACTCCTCCAGCTAAGATGCCCTCTCAAACAGGTCAGAGTACTCCTCGAGCTTCGTCAAATCCGATGGGAACTCCAACACCTTCGCCACCCGCGTCTGCTCCACCGATTGCGAGCAGTACTAGCCCCACCTCACAAATATGGGATAAGGGTGTTTCGGTGAAGGAATACTTGATGAACAAATTTGAGCCAGGTGAAGATGAGAAAGCTCTCTCGAAAGTGATATCGGAAGCAATGAGTCCTAGGAGAAATCCCGGTGATGTGGGCGTGATTGAGAAGGTGAGAGAAGCTGTAACCTCTTTGCTCCGAACTGAGGAACCAACAAAACCTGAAGACACAAACACAACCAATACTACCCATACACCATCCCAAGTCTCAGCATCTACCAGCACTACTCGTACACCGTCCCAAGTCTCAGCATCTACCAGCACTACTCGCGCACCATCCCAAGTGTCAGCATCTACCACCACTACTCGCGGACCATCCCAAATCTCAGCATCTAGCACCACTACTCGCTCACCATCCCAAGTCTCAGCATCTACCAGCACTACTCGCACACCATCCCAACTCTCTGCATCTACCAGCACTACTCACGCACCATCCCAAGTCTCAGCATCTACCAGCACTACTCGCGCACCATCCCAAGTCTCAGTATCTACCAGCACTACTCGCGCACCATCTCGAATCCCTGTATCTTTCAACGCTCAAGAAGCAGTTCAGGAAGAAAACCATGGCAGGATTCTTCAGGCAAATTGA 1551 0.4836 MAQLERPQSQRYVDGSKNPATIQTMEQLLRGEASKSSKSKLSPSKSSSSSACSSPSSPFFQRLRHHDTEEDHGQNQKKSVMTKVKEKAKKLRHSLSKKRHEDWNPISPSSGSGQEGDGAEEDAECRGAPMYESEKAPEGYNGYVRQHSRMSPKSPQKHVLSNNEKLGLEQAREKTLNRSLSKKTTQPAAAPAATAATTPSGPSKILTKPVAEKNLTPAYAEGSETAQYITSKFQGLSVSKPGEHHSSSTTAATTHKPSSLTIRASRTPPAKMPSQTGQSTPRASSNPMGTPTPSPPASAPPIASSTSPTSQIWDKGVSVKEYLMNKFEPGEDEKALSKVISEAMSPRRNPGDVGVIEKVREAVTSLLRTEEPTKPEDTNTTNTTHTPSQVSASTSTTRTPSQVSASTSTTRAPSQVSASTTTTRGPSQISASSTTTRSPSQVSASTSTTRTPSQLSASTSTTHAPSQVSASTSTTRAPSQVSVSTSTTRAPSRIPVSFNAQEAVQEENHGRILQAN* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2101 516 MobiDBLite consensus disorder prediction 236 313 - -
Tpr3g2101 516 MobiDBLite consensus disorder prediction 288 302 - -
Tpr3g2101 516 MobiDBLite consensus disorder prediction 376 504 - -
Tpr3g2101 516 MobiDBLite consensus disorder prediction 236 287 - -
Tpr3g2101 516 MobiDBLite consensus disorder prediction 1 209 - -
Tpr3g2101 516 MobiDBLite consensus disorder prediction 327 516 - -
Tpr3g2101 516 MobiDBLite consensus disorder prediction 180 204 - -
Tpr3g2101 516 MobiDBLite consensus disorder prediction 62 82 - -
Tpr3g2101 516 MobiDBLite consensus disorder prediction 147 163 - -
Tpr3g2101 516 PANTHER LOW-TEMPERATURE-INDUCED PROTEIN 35 516 - -
Tpr3g2101 516 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 35 516 IPR037491 GO:0009737
Tpr3g2101 516 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2101 Tpr-Chr3 19373675 19376086 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2101 - - ccaj:109816311 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4518 7 53770596 53772238 Tpr3g2101 3 19373675 19376086 PCT