Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2078 ATGGCTACCACCTCTAACGTCATCCATACCAAGCTTCTAGAATTACCAAGAACCAACCGCCACTCCCGGATCTCATTCTCCGCCAACAACCACCACCGTGTCTCTGCAACAACCTCCGCCGAGGGACCTTCCTGCATCTTCGTTGGCCCTCTCGAAACAGCCAATAAAGAAACCCTCGAAGCTCTCTATTGCCAAGCACGTGATGCTTATTATAGCGGCGAGCCTTTGATACTTGATGACATGTTTGATAGAGTAGAGTTAAAGCTAAGATGGTTTGGTTCAAAGTCAGTTGTCAAGTATCCTCGATGCAGTATCAGGAGGCAATCAACATATGCTGATGCTGAGGAAGATCTGTCTATGGTTCTTGCATTAGCTAGCACATGGACCGTGTTCCTTGCATTTGGAAGTTTAGCGTGTCTTGGGCCAATATCATACACCGTTGGGATGGCTTATCAAAATGCATTCGATTCAGGATTATCATATAGAAGCCAGGCATCTGCATTCGAGTTTCTGGCATCGGTGAATAGCATTTTGTTCATTGTGCTGGGATTTGTCATCGGGTACCCAGTTGCGTCAGCTTCAGTTAAGATACTTCATGGCCTATGGAGGAATGATTTGGCAGCACTAAGAGGTGCATGCCCAAATTGTGGAGAAGAGGTATTTGCATTTGTGCGAATGGACCGGAATTTTGACTCACCTCACAGAACAGATTGTCATGTGTGTGAATGCTTATTAGAATTTCGCACCAACGTGGAGCAATCAGTTTCAAGACTCGGTAGACAGTGGGTTTATGGGCGTATTTACCTTGTTTCACCGAGAGGCAGATCCCGACGCCAAAGACAACTGTAA 849 0.4605 MATTSNVIHTKLLELPRTNRHSRISFSANNHHRVSATTSAEGPSCIFVGPLETANKETLEALYCQARDAYYSGEPLILDDMFDRVELKLRWFGSKSVVKYPRCSIRRQSTYADAEEDLSMVLALASTWTVFLAFGSLACLGPISYTVGMAYQNAFDSGLSYRSQASAFEFLASVNSILFIVLGFVIGYPVASASVKILHGLWRNDLAALRGACPNCGEEVFAFVRMDRNFDSPHRTDCHVCECLLEFRTNVEQSVSRLGRQWVYGRIYLVSPRGRSRRQRQL* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2078 282 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 21 277 IPR039987 GO:0009535|GO:0009773|GO:0016730
Tpr3g2078 282 PANTHER PGR5-LIKE A PROTEIN 21 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2078 Tpr-Chr3 19146584 19149364 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2078 - - cam:101497318 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2078 3 19146584 19149364 Tpr3g2078 3 19146584 19149364 ECH
Tpr7g4499 7 53635960 53639120 Tpr3g2078 3 19146584 19149364 PCT