Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2060 ATGGCTTCTTCTTCCTCTTCCCTTATCCTCATTTCCTCTTTCATCTTCCTCACCATTTTCTCACCCTCACAAGCTCTCGTCTTCACCTTCGTCAACAACTGCCCATACACCGTCTGGCCAGCCATACTCCCCAACGAAGGCTTCCCCGTCCTCAATACCAGCGGCTTCGAACTCCGCCACTTCACCCACCTCTCCATCCCCGTCCCAGACACCCACTGGGCCGGCCGTGCTTGGGCAAGAACCGGCTGCACAACCACCAACAACCAATTCACCTGCCTCACCGGCGACTGCGGCAACCGTCTTCAATGCAACCGTCAAGGCGGTTTAGCTCCAGCAACACTAGTCCAATTCGACGTACACCACGGTAACAGCGATTTCTCATCTTACAGCGTCAGTCTCGTCGACGGTTTCAACGCTCCGATGACGGTTACTCCTCATGAAGGTAAAGGCGAATGTCCGGTAGTTGGTTGCCGTGCTGATCTTGTTGCCACGTGTCCTCCTGTTTTACAGCACCGTGTTCCGGCGGTTCATGGTCCTGTTGTGGCTTGTAAGAGTGGTTGCGAAGCTTTTCATAGTGATGAGTTGTGTTGTAGGAATCATTTTAATAATCCTCAAACGTGTAAACCTTCGGTGTATTCCACGCACTTTAAACACGCGTGTCCTGCTACTTTTACTTATGCGCATGATTCTCCTTCTTTGACTCATCAGTGTTCTTCACCTCGTGAGCTTAAGGTTATCTTTTGCCATTGA 750 0.5107 MASSSSSLILISSFIFLTIFSPSQALVFTFVNNCPYTVWPAILPNEGFPVLNTSGFELRHFTHLSIPVPDTHWAGRAWARTGCTTTNNQFTCLTGDCGNRLQCNRQGGLAPATLVQFDVHHGNSDFSSYSVSLVDGFNAPMTVTPHEGKGECPVVGCRADLVATCPPVLQHRVPAVHGPVVACKSGCEAFHSDELCCRNHFNNPQTCKPSVYSTHFKHACPATFTYAHDSPSLTHQCSSPRELKVIFCH* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2060 249 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Tpr3g2060 249 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Tpr3g2060 249 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Tpr3g2060 249 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Tpr3g2060 249 PIRSF PR5 1 249 IPR001938 -
Tpr3g2060 249 SUPERFAMILY Osmotin, thaumatin-like protein 27 248 IPR037176 -
Tpr3g2060 249 SMART tha2 28 249 IPR001938 -
Tpr3g2060 249 Gene3D Thaumatin 27 248 IPR037176 -
Tpr3g2060 249 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 10 249 - -
Tpr3g2060 249 PANTHER OS03G0233200 PROTEIN 10 249 IPR001938 -
Tpr3g2060 249 CDD TLP-PA 27 248 - -
Tpr3g2060 249 ProSiteProfiles Thaumatin family profile. 25 249 IPR001938 -
Tpr3g2060 249 Pfam Thaumatin family 32 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2060 Tpr-Chr3 18923849 18925005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2060 3 248 Receptor kinase-like Gene Family AT5G38280 36.653 3.93e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2060 - - cam:101503313 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2060 3 18923849 18925005 Tpr3g2060 3 18923849 18925005 ECH