Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2057 ATGGGAGAGAGGGTGGATAAGTCTAACATGAGCATGAGCTCTAATTCTAAACAAAACAGTCTTATCACTGGGAAAAAAACGTACCAAAAACAGTTGGTTGCATCACGTCCTAAAGGCTTTGCACAGAGATATTGTGAACCCCTTGTTTCATTGAGAGATAGTGACTTTGGAAGCAGTGCTGTGGGGCGTGCCACATTTTTTTTACTTAAAGTTGCTGCTTTAGAGACTGTAAGGAGGTTCTCCAAGAGTAGATACCCATGTTTGTGGCGAGGTCTGCAGGGTCTACAAATCCTTGCCATACCACCATTTCAATATATTCAGAGGTGGGCTGTCTTCAGGGGTTTGGTCAAAAGCATGCAGGTACTATCAAGACCATTATTAGTCCTTTCCATTGCGACAGTCTTTACTGAAGAACTGGAATGTAGTGATGGAACCTCAGATCATCTTACTGACTCTCATGATTCAGAAGTATCTGCAGCAGAACCATCTCCTGTGCAGGATAATTTGAATATTAGTCAACCTGAGAGAGCTCCTGAAGTTTTAGAATATGAAAAATGGTTGACTCAACTAAACCAAGAGCTGGAAAATCAAGGGATTTGTTTGCCAGAAAGAATCAACGACGATGAGCTCCACAGATTTTACGCAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACAATACGCTGGCGAGAGTGTTACAAAATTCTTTCAGTAGAAGAGCTGGAAATGTGGTCAAATATGGTGTTTTGGCATGGATCTGATTTGTTGCACAGACCTTGTCTCATTGTAAGGCTTGGGATGGCTTGCAGCTCACTGGCCTCCCAAGATAAACCTCGATTTGCTCAGGCAATTGTATCACAGGTAGAATATGGTGTCTTGCGCTTAGTTGATAGAGAGAACCCTCAAATTACAGTATTGGTTGACTGTGAAGGGTTATCTCCATTGAGAATTCCCATGCAAATACTGAGATCTTGTTCTTCCATTCTGCAAGATCATTTTCCTAATCGTCTTGGTTGTTTGTTTGTCATAAGACTTCCCGCAATTGCTCGTGTTATTGCCCAGACTTTTATTCAGGTTATAAAGCCAGCTACTAAGAAAAAGTTGAAAATTGAAGGAGAGATGTACAAGAAGCTTCTTTATGACTATCTGCCGACACTACCATTATATCTTGGAGGCCGCTGCACATGCGAGAAATGTTCTAAAATGGTCAATCACAATATGGTACAACCACATGAAACTGGAACCAGCACCAGCAGGATTGTTAGGGAGGATGATATCAGTGACAACGAGGATTCACCATCACTACATCCATCTATTGTATTAGATGAAAGTCAAAACAACAGCTATGATCAGTTGTTGAGAACTGCTGTCATTAGTCTTCTCGTATTTTGGGTTGTCGTAGCTCTTGGTGCTGGAATGTATGGACCCCCCGGTATGTAA 1455 0.4151 MGERVDKSNMSMSSNSKQNSLITGKKTYQKQLVASRPKGFAQRYCEPLVSLRDSDFGSSAVGRATFFLLKVAALETVRRFSKSRYPCLWRGLQGLQILAIPPFQYIQRWAVFRGLVKSMQVLSRPLLVLSIATVFTEELECSDGTSDHLTDSHDSEVSAAEPSPVQDNLNISQPERAPEVLEYEKWLTQLNQELENQGICLPERINDDELHRFYAASNNDFSCFLTSIKKTIRWRECYKILSVEELEMWSNMVFWHGSDLLHRPCLIVRLGMACSSLASQDKPRFAQAIVSQVEYGVLRLVDRENPQITVLVDCEGLSPLRIPMQILRSCSSILQDHFPNRLGCLFVIRLPAIARVIAQTFIQVIKPATKKKLKIEGEMYKKLLYDYLPTLPLYLGGRCTCEKCSKMVNHNMVQPHETGTSTSRIVREDDISDNEDSPSLHPSIVLDESQNNSYDQLLRTAVISLLVFWVVVALGAGMYGPPGM* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2057 484 SMART sec14_4 247 400 IPR001251 -
Tpr3g2057 484 Gene3D - 180 436 IPR036865 -
Tpr3g2057 484 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 255 403 IPR001251 -
Tpr3g2057 484 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 11 480 - -
Tpr3g2057 484 MobiDBLite consensus disorder prediction 1 20 - -
Tpr3g2057 484 SUPERFAMILY CRAL/TRIO domain 248 402 IPR036865 -
Tpr3g2057 484 Pfam CRAL/TRIO domain 251 397 IPR001251 -
Tpr3g2057 484 CDD SEC14 244 397 IPR001251 -
Tpr3g2057 484 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2057 Tpr-Chr3 18896893 18903353 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2057 - - gmx:100814843 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2057 3 18896893 18903353 Tpr3g2057 3 18896893 18903353 ECH