Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2034 ATGGCACCAAAGGGAGAGAAGAAGCCAGCGGAGAAGAAACCCGCAGAGGAGAAGAAGTCGACCGTAGCAGAGAAGGCTCCCGCTGAGAAGAAGCCAAAGGCAGGAAAGAAGCTGCCAAAGGACGGTGGTTCAGCCGCTGCCGGAGAGAAGAAGAAGAAGAGAAACAAGAAGAGCGTAGAAACATACAAGATCTACATCTTCAAAGTTCTGAAACAAGTTCACCCTGACATTGGTATCTCAAGCAAAGCCATGGGTATAATGAACAGTTTCATCAACGACATATTCGAGAAACTCGCACAAGAATCATCAAGACTTGCAAGGTACAACAAGAAGCCAACAATCACTTCTAGGGAAATTCAAACTGCTGTCAGACTTGTTCTTCCTGGTGAATTGGCCAAGCATGCTGTTTCTGAGGGTACCAAAGCTGTGACCAAGTTCACAAGTTCTTAG 450 0.4622 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKDGGSAAAGEKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2034 149 Pfam Core histone H2A/H2B/H3/H4 1 125 IPR007125 GO:0003677
Tpr3g2034 149 PRINTS Histone H2B signature 62 80 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tpr3g2034 149 PRINTS Histone H2B signature 81 101 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tpr3g2034 149 PRINTS Histone H2B signature 103 120 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tpr3g2034 149 PRINTS Histone H2B signature 120 133 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tpr3g2034 149 PRINTS Histone H2B signature 133 146 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tpr3g2034 149 MobiDBLite consensus disorder prediction 1 57 - -
Tpr3g2034 149 PANTHER HISTONE H2B.1-RELATED 5 149 - -
Tpr3g2034 149 PANTHER HISTONE H2B 5 149 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tpr3g2034 149 SUPERFAMILY Histone-fold 34 149 IPR009072 GO:0046982
Tpr3g2034 149 SMART h2b3 52 148 IPR000558 GO:0000786|GO:0003677|GO:0030527
Tpr3g2034 149 Gene3D Histone, subunit A 23 149 IPR009072 GO:0046982
Tpr3g2034 149 ProSitePatterns Histone H2B signature. 117 139 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2034 Tpr-Chr3 18618023 18618779 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2034 K11252 - gmx:100778668 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2034 3 18618023 18618779 Tpr3g2034 3 18618023 18618779 ECH