Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2031 ATGTCTTCCAGTTTCAGAGGAAGAACAGCCACTTCCAGAGAAATCAGTCCAGAAAGAACCAAAGTTTGGACCGAACCAAAACCCAAAACTCCCAGAAAAGTTTCCGTCGTTTACTATCTCTCCCGTAACGGCCACCTCGAACACCCTCATTTCATGGAAGTCCCTCTCTCCGATCCTCACGGTCTCTACCTCAAAGATGTAATCATTCGCTTGAACCTTCTCCGTGGGAAAGCCATGGCTACTATGTACTCATGGTCCTCTAAACGGAGTTACAAAAACGGTTTCGTTTGGCATGATTTATCTGAGAATGATTTCATCTACCCAACGCAAGGGCAAGATTACGTTCTCAAAGGATCTGAGATTCTCGATCACGTAACCACCGTACAAACACCGCCGGAAGAAGAATCTGATTCTCCGGTGGTGATTACGAGGCGGCGTAATCAGTCGTGGAGTTCGATTGACTTAAACGAGTACCGAGTTTATAAGTCTGAGTCGTTAGGTGACTCGGTTGGAAATGTCGCCACTAACGCGTCGACTCAGACGGAGGATAAACGGAGACGGAGGAGAGTTGTGAAGGAAAATGAAGAAGAAGAGAAAGAGAAGAATGAAATTGAAAACGATGAAATTCAGAGTACGGAACTGAGTAGGGAAGAGATCTCGCCTCCACCGTCGGATTCAAGTCCAGAAACATTGGGAACATTGATGAAAGTAGATGGACGGCTGGGATTAAGATCTTCGGTTCCTGTTAAGGAGAATCCGACGGTTGAGAGTTGTCCAAGTGGAAGGATGAGAGCTTCATCGGTACTCTTGCAATTGTTATCGTGCGGTGCGGTGTCTTTCAAGGAGAGTAGTGGAAGTGGGGCTAGTTCAGGTGAAGATCAACGGTTCTCGTTGGTTGGGCACTATAAGTCTAGGTTGCCCCGCGGAGGAGGGAATCATGTGGGAAAAGAAGTGGGGACATTGGTGGAAATTCCTGATTTGAATAGGGTAAGATTGGAAGATAAAGAGTATTTTAGTGGAAGCTTGATTGAAACCAAAAAAGTTGAAGCTCCTGCATTCAAAAGGTCCTCTTCGTACAATGCAGATAGCGGTTCCCGGATGCAAATCATGGAACATGAAGGCGATATGGTGCGGGCAAAATGCATACCAAGGAAGTCGAAGACACTACCAACAAAGAAAGAAGAGGGTACTTCCAGTAGCATGGACAATGTTAGCCGTAGTCAACATGGAAGCAAAAGATTTGAGGGACAGCATGGAAGTTTGTAG 1266 0.4597 MSSSFRGRTATSREISPERTKVWTEPKPKTPRKVSVVYYLSRNGHLEHPHFMEVPLSDPHGLYLKDVIIRLNLLRGKAMATMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYVLKGSEILDHVTTVQTPPEEESDSPVVITRRRNQSWSSIDLNEYRVYKSESLGDSVGNVATNASTQTEDKRRRRRVVKENEEEEKEKNEIENDEIQSTELSREEISPPPSDSSPETLGTLMKVDGRLGLRSSVPVKENPTVESCPSGRMRASSVLLQLLSCGAVSFKESSGSGASSGEDQRFSLVGHYKSRLPRGGGNHVGKEVGTLVEIPDLNRVRLEDKEYFSGSLIETKKVEAPAFKRSSSYNADSGSRMQIMEHEGDMVRAKCIPRKSKTLPTKKEEGTSSSMDNVSRSQHGSKRFEGQHGSL* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2031 421 MobiDBLite consensus disorder prediction 171 231 - -
Tpr3g2031 421 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 9 386 IPR010369 -
Tpr3g2031 421 MobiDBLite consensus disorder prediction 376 421 - -
Tpr3g2031 421 PANTHER OS01G0839200 PROTEIN 9 386 - -
Tpr3g2031 421 MobiDBLite consensus disorder prediction 180 214 - -
Tpr3g2031 421 Coils Coil 187 217 - -
Tpr3g2031 421 MobiDBLite consensus disorder prediction 12 27 - -
Tpr3g2031 421 MobiDBLite consensus disorder prediction 215 231 - -
Tpr3g2031 421 MobiDBLite consensus disorder prediction 376 392 - -
Tpr3g2031 421 MobiDBLite consensus disorder prediction 393 407 - -
Tpr3g2031 421 MobiDBLite consensus disorder prediction 1 27 - -
Tpr3g2031 421 PIRSF UCP031043 1 407 IPR021182 -
Tpr3g2031 421 Pfam Protein SOSEKI, plant 34 127 IPR010369 -
Tpr3g2031 421 Pfam Protein SOSEKI, plant 133 363 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2031 Tpr-Chr3 18589538 18593490 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2031 - - gmx:100779732 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2031 3 18589538 18593490 Tpr3g2031 3 18589538 18593490 ECH