Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2011 ATGAAAGGAATAGACATGTTCTGTTCTTCCCCTGCTTCAACAGCAATAATACATAGTAATATGGATCAACGTTCTATGCTACGACGAAGCAGAACCACGAAAACCTACGATCAAAGGAAAAACCAACTTCATCATGTTCCTTGTTCATCTCAATTACCTATTAATCCTATGCCTTACTTTGAGAAACATAGAAAAAGTTCATCAGATAAACAAAATAGTAGTACTACTACTGACACTCGTAGGAAAAGCTCCGCTAATGTCAACGATCTTTCTTCGAGAAGATATCTTCTCGATGACACGCCATTCATTGATTGGTTATCTGAGTCTAACAAAATATTGGTTCCTCGAGGTGAAGCCGAAGCTGTGTCCATGGATAAGAAAAGAAAAAATGATTCTCATGCTCTAGTTAGGTCCTCTTCTTCAGCTCTCTCCTCCAAGGACCAGGTTGTGGTTCTAAGGGTGTCATTGCACTGCAAAGCCTGCGAAGGAAAAGTCAGAAAACATATTTCGAAAATGGAAGGAGTGAGATCATTCAACATAGAAATGGAGACAAAAAAAGTAACAATTATCGGAGCCGTGACGCCTTTAGATGTACTAGCAAGTGTATCCAAGGTGAAGAGTGCACAACTATGGCCGTCTACAACATCGTCATCCTCATCATCTAGACTAACATTTCCATGA 681 0.3979 MKGIDMFCSSPASTAIIHSNMDQRSMLRRSRTTKTYDQRKNQLHHVPCSSQLPINPMPYFEKHRKSSSDKQNSSTTTDTRRKSSANVNDLSSRRYLLDDTPFIDWLSESNKILVPRGEAEAVSMDKKRKNDSHALVRSSSSALSSKDQVVVLRVSLHCKACEGKVRKHISKMEGVRSFNIEMETKKVTIIGAVTPLDVLASVSKVKSAQLWPSTTSSSSSSRLTFP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2011 226 MobiDBLite consensus disorder prediction 24 87 - -
Tpr3g2011 226 PANTHER OS08G0405700 PROTEIN 1 221 IPR044526 -
Tpr3g2011 226 Gene3D - 144 208 - -
Tpr3g2011 226 ProSiteProfiles Heavy-metal-associated domain profile. 148 205 IPR006121 GO:0046872
Tpr3g2011 226 MobiDBLite consensus disorder prediction 70 87 - -
Tpr3g2011 226 MobiDBLite consensus disorder prediction 24 41 - -
Tpr3g2011 226 SUPERFAMILY HMA, heavy metal-associated domain 148 205 IPR036163 GO:0046872
Tpr3g2011 226 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 221 - -
Tpr3g2011 226 Pfam Heavy-metal-associated domain 152 204 IPR006121 GO:0046872
Tpr3g2011 226 CDD HMA 151 204 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2011 Tpr-Chr3 18351757 18353446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2011 - - gmx:100807544 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2011 3 18351757 18353446 Tpr3g2011 3 18351757 18353446 ECH