Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1736 ATGGCTGTGCAGGATCCATCATACCCGGCCTATGTAGACTCAAGTGTAATTATGGGCCAAACTGGTCTATACCAGAAGGACGTTCAGAAGTTTGCAAACATTGAGTACATGAGGTGTAATCCAGAAAATGGTTTCTTCCCTGATTTGTCATCTCTTTCTCGACCAGATATCATATTTTTCTGTTCTCCAAACAATCCTACTGGTGCTGCAGCAACAAGGGAGCAACTGGTCCAACTAGTTCGGTTTGCTAAGGACAATGGATCTATAATAGTATATGACTCAGCGTATGCTATGTATATTTCTGGCGACAACCCACGCTCCATCTTTGAAATTCCTGGAGCCAAAGAGGTTGCCATTGAAACTTCATCATTTAGCAAGTATGCTGGGTTCACTGGAGTTCGACTGGGTTGGACTGTGGTTCCAAAGCAGTTACTGTTTTCTGATGGATTTCCCGTTGCCAAGGACTTCAACCGTATCGTATCTACTTGTTTCAATGGTGCATCAAATATTTCCCAGGCTGGTGGTCTTGCCTGCCTTTCACCAGAAGGCCTTAAGGCTATGCGCGGGGTTATTGGATTCTACAAAGAAAATACTAACATAATAGTCGACACATTTGATTCTCTCGGGTTTAAAGTGTATGGAGGGAAAAGTGCACCGTACGTGTGGGTCCACTTCCCAGGCCAAAATTCATGGGATGTATTCAGTGAGATTCTTGAGAAGACACATGTGGTTACAACTCCTGGCAGTGGTTTTGGACCCGGTGGTGAAGGTTTTGTCAGGGTTAGTGCCTTTGGTCACAGGGAAAATGTCTTGGAGGCCTGCAGAAGATTCAAGAAGCTATACAAGTGA 849 0.4452 MAVQDPSYPAYVDSSVIMGQTGLYQKDVQKFANIEYMRCNPENGFFPDLSSLSRPDIIFFCSPNNPTGAAATREQLVQLVRFAKDNGSIIVYDSAYAMYISGDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVSTCFNGASNISQAGGLACLSPEGLKAMRGVIGFYKENTNIIVDTFDSLGFKVYGGKSAPYVWVHFPGQNSWDVFSEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENVLEACRRFKKLYK* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1736 282 Gene3D Aspartate Aminotransferase, domain 1 178 282 IPR015422 GO:0003824
Tpr3g1736 282 PANTHER AMINOTRANSFERASE 1 282 IPR019942 GO:0008483
Tpr3g1736 282 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 1 279 IPR019942 GO:0008483
Tpr3g1736 282 Pfam Aminotransferase class I and II 34 277 IPR004839 GO:0009058|GO:0030170
Tpr3g1736 282 CDD AAT_like 2 279 - -
Tpr3g1736 282 SUPERFAMILY PLP-dependent transferases 3 278 IPR015424 -
Tpr3g1736 282 Gene3D - 1 177 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1736 Tpr-Chr3 15383527 15387087 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1736 K10206 - gmx:100801405 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1736 3 15383527 15387087 Tpr3g1736 3 15383527 15387087 ECH