Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1735 ATGGAAGACTACAATTTTGTTGTTGGTCAAATATTCCCTGATGTGAAGGCATTTCGTAATGCTATTAAAGAAGCTGCTATTGCACAACATTTTGAGCTTCGTATTATTAAAAGTGACTTGATTCGATACTTTGCTAAGTGTGCCTCTGATGGCTGTCCATGGCGGATTCGTGCTGTCAAGCTCCCAAATGCCTCGACATTTATCATAAGAAGTCTTGAAGGGACACATACTTGTGGGAGAAATGCACTCAATGGACACCACCAGGCTTCTGTTGATTGGATTGTGAGTTTTATAGAAGAAAGATTACGGGATAACATCAATTATAAACCAAAAGATATTTTACATGACATTCATAAGCAATATGGTATAACTATACCATATAAGCAAGCTTGGCGTGCAAAGGAACGGGGCCTTGCAGCAATATATGGCTCTTCTGAAGAAGGATTTTACCTACTTCCTTCATACTGTGAAGAAATAAAGAAAACAAATCCCGGAAGTGTTGCAGAGGTGTTTACCACTGGTGCAGATAACCGTTTTCAGAGACTTTTTGTTTCCTTTTATGCATCAATTCATGGCTTTGTTAATGGTTGTTTTCCCATTGTTTCTCTTGGTGGAATCCAGCTGAAAAGCAAATACCTTAGCACATTCCTTTCAGCAACTTCTTTTGATGCTGATGGTGGGTTGTTTCCACTTGCTTTCGCTGTTGTCGATGTAGAAAATGATGAAAGCTGGACATGGTTCCTGTCTGAGTTGCATAAGGCACTAGAGGTGAATATTGAGTGCAATCCAGAAATTATATTTTTATCAGATGGGCAAAAGGGTATTGTGGATGCAATAAGAAGGAAGTTCCCAAAATCTTCCCATGCATTCTGCATGCGCCACTTAAGTGAATGCATTAGCAAAGAATTCAAGAACGCTAGGCTTATCCATCTTCTATGGAAGGCTGCATATGCTACTACAATTACTGCATTCAAAGAAAAAATGGCTCAAATAGAAGAAGCCTCTCCCGAAGCCACCAAATGGTTACAGCAATTTCCTCCTTCCCAGTGGGCCCTAGTATATTTTGAAGGGACAAGATATGGTCATTTATCTTCTAATATCGAGGAGTTCAATAAATGGATTCTTGATGCCCGGGAATTGCCAATTATCCAGGTAATTGAGCGGATTCATGACAATCTTACAACTGTGTTTGACGACAGGCGTTTGAAAAGCAGTTCATGGTGTTCTGTGCTTGCTCCATCTGCTGAGAGGCGAATGGTTGAAGCCGTTAATTACGCATCCACATATCAAGTGCTTAGATCGGATGAGGTAGAGTTCGAGGTTATTTCAGCCGATCGATCCGATATTGTAAATATTGGCAGCCGTAGCTGCTCCTGTCGTGATTGGCAGCTATATGGGATACCGTGTTCCCATGCCATTGCTGCTCTTATCTCATGCCGTAAGGATGTCTATGCATATACTGCAAAGTGTTTTACTGTTGCAAGTTACAGGGATACCTATGCAGAGGAATTACACCCTGTCCCTAGAAAACTTGAATGGAGGAGAACAGATGAATCTGTTTTGGATAATGATATTGCAGTTGTGCGACCGCCAAAATTTCGCCGACCTCCAGGGCGCCCGGAAAATAAACGAATTTGTGTGGAGGACCATAATCGCGACAAACATACAGTGCATTGTAGTCGCTGCAATCAAACTGGACATTACAAGACAACATGCAAAGCAGAGATGATTAATAGTATAGAACAGTTTTAG 1752 0.4115 MEDYNFVVGQIFPDVKAFRNAIKEAAIAQHFELRIIKSDLIRYFAKCASDGCPWRIRAVKLPNASTFIIRSLEGTHTCGRNALNGHHQASVDWIVSFIEERLRDNINYKPKDILHDIHKQYGITIPYKQAWRAKERGLAAIYGSSEEGFYLLPSYCEEIKKTNPGSVAEVFTTGADNRFQRLFVSFYASIHGFVNGCFPIVSLGGIQLKSKYLSTFLSATSFDADGGLFPLAFAVVDVENDESWTWFLSELHKALEVNIECNPEIIFLSDGQKGIVDAIRRKFPKSSHAFCMRHLSECISKEFKNARLIHLLWKAAYATTITAFKEKMAQIEEASPEATKWLQQFPPSQWALVYFEGTRYGHLSSNIEEFNKWILDARELPIIQVIERIHDNLTTVFDDRRLKSSSWCSVLAPSAERRMVEAVNYASTYQVLRSDEVEFEVISADRSDIVNIGSRSCSCRDWQLYGIPCSHAIAALISCRKDVYAYTAKCFTVASYRDTYAEELHPVPRKLEWRRTDESVLDNDIAVVRPPKFRRPPGRPENKRICVEDHNRDKHTVHCSRCNQTGHYKTTCKAEMINSIEQF* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1735 583 SMART 26again6 455 482 IPR006564 GO:0008270
Tpr3g1735 583 ProSiteProfiles Zinc finger SWIM-type profile. 439 480 IPR007527 GO:0008270
Tpr3g1735 583 Pfam SWIM zinc finger 446 479 IPR007527 GO:0008270
Tpr3g1735 583 PANTHER OS01G0334000 PROTEIN 1 574 - -
Tpr3g1735 583 Pfam MULE transposase domain 208 296 IPR018289 -
Tpr3g1735 583 Pfam MuDR family transposase 5 69 IPR004332 -
Tpr3g1735 583 PANTHER POLYPROTEIN, PUTATIVE-RELATED 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1735 Tpr-Chr3 15379265 15382834 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1735 - - gmx:100800865 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1735 3 15379265 15382834 Tpr3g1735 3 15379265 15382834 ECH