Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1733 ATGGAAGCACATGCAGCTGGAGCCAATCAGAGGATTGCAAGAATCTCTGCTCATCTTCATCCTCCAAATTTCCAGGAAGGAGGTGATGTTTCAATTGACAGAGCTAACTGCAGAGCAAAAGGTGGGGCGCCGGGATTCAAAGTTGCAATCTTGGGGGCTGCTGGTGGAATTGGTCAATCTCTTTCTTTGCTGTTGAAGATTAATCCATTGGTTTCAGTTCTTCATCTTTATGATGTTGTCAACACTCCTGGTGTCACTGCTGATGTTAGTCACATTGACACCGGTGCTGTGGTTCGTGGCTTTCTAGGGCAGGCACAACTTGAGAATGCATTGACAGGCATGGACTTGGTCGTTATACCTGCTGGTGTGCCGAGGAAACCTGGAATGACAAGGGATGACTTATTTAAGATAAATGCTGGAATTGTGAGGACTCTTTGTGAAGGAATTGCCAAGAGCTGTCCTAATGCAATTGTCAACTTGATTAGCAATCCAGTGAATTCCACTGTGCCCATTGCTGCTGAGGTCTTCAAGAAAGCCGGTACATATGATCCAAAGCGACTTTTAGGGGTTACAACCCTCGATGTTGCGAGGGCAAATACTTTTGTGGCAGAAGTACTCGGTGTTGATCCAAGAGAGGTTGATGTTCCAGTGGTAGGAGGGCATGCAGGAGTCACAATATTACCTCTTCTGTCACAGGTTAAGCCTCCCAGTAGCTTCACTGCAGAAGAAACCGAATACCTGACAAATCGCATTCAAAATGGTGGAACAGAAGTTGTTGAGGCAAAAGCTGGGGCTGGTTCTGCAACACTATCAATGGCATATGCAGCTGCTAAGTTTGCTAACTCGTGCCTCCGTGGCTTGAAAGGAGAAGCCGGGATAGTGGAGTGTTCTTATGTTGATTCTCAGGTTACGGAACTTCCTTTCTTTGCAGCCAAGGTTCGTCTTGGTCGCGGTGGAGCAGAAGAGATATATCAACTTGGTCCCCTTAATGAGTACGAGAGAATTGGGTTGGAAAAAGCGAAGAAAGAGTTAGCAGGAAGCATCCAGAAGGGAGTAGAATTCATCAAAAAATAA 1074 0.46 MEAHAAGANQRIARISAHLHPPNFQEGGDVSIDRANCRAKGGAPGFKVAILGAAGGIGQSLSLLLKINPLVSVLHLYDVVNTPGVTADVSHIDTGAVVRGFLGQAQLENALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVRTLCEGIAKSCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVARANTFVAEVLGVDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTAEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFANSCLRGLKGEAGIVECSYVDSQVTELPFFAAKVRLGRGGAEEIYQLGPLNEYERIGLEKAKKELAGSIQKGVEFIKK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1733 357 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 191 355 IPR022383 GO:0016616
Tpr3g1733 357 PANTHER MALATE DEHYDROGENASE 2, PEROXISOMAL 6 357 - -
Tpr3g1733 357 SUPERFAMILY LDH C-terminal domain-like 190 356 IPR015955 GO:0003824|GO:0016616
Tpr3g1733 357 PANTHER MALATE AND LACTATE DEHYDROGENASE 6 357 - -
Tpr3g1733 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 189 IPR036291 -
Tpr3g1733 357 ProSitePatterns Malate dehydrogenase active site signature. 190 202 IPR001252 GO:0006108|GO:0016615
Tpr3g1733 357 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 47 356 IPR010097 GO:0006099|GO:0030060
Tpr3g1733 357 Gene3D - 38 190 - -
Tpr3g1733 357 Pfam lactate/malate dehydrogenase, NAD binding domain 47 189 IPR001236 GO:0016491
Tpr3g1733 357 PIRSF Lac_mal_DH 45 355 IPR001557 GO:0016616|GO:0019752
Tpr3g1733 357 CDD MDH_glyoxysomal_mitochondrial 46 355 IPR010097 GO:0006099|GO:0030060
Tpr3g1733 357 Gene3D - 191 357 IPR015955 GO:0003824|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1733 Tpr-Chr3 15350350 15353398 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1733 K00026 - gmx:100170735 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1733 3 15350350 15353398 Tpr3g1733 3 15350350 15353398 ECH