Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1730 ATGACTTCATCGGAGATCGAAGTTGTATCATCGGACTCCAAACCCCAACAACAACAGCAGCAACAACAACCTCCCATACTCGACGTTTTTACTGCCTCTATCCATGGTGACTTGCAAAAATTGAGAACCTTTGTTGAACAAGACGGTGCCTCTGTTTCTCTTCCAGATATTAATGGCTATTATGCTCTTCAATGGGCTTCTCTTAATAACTTCCATGACATTGTTCATTATCTCATTCAGCATGGTAGTAATGTCAATGCTAAAGACAACATGCAACAAACGGCTTTACATTGGGCGGCAGTTCGCGGGTCAATTGCAGCAGCTGATGTGCTCTTGGAGAATGGTGCTAGGGTTGAAGCTTCTGATATAAATGGATACCGGGCAGTTCATGTTGCTGCACAATATGGACAGACAGCTTTCTTAAATCACATTGTTGTAAAATACCATGCTGATTTTGATGTGCCTGATAATGACGGAAGGAGTCCTCTACATTGGGCTGCGTATAAGGGATATGCTGATGCAACAAGATTACTTCTATTTAGAGATGCAAGTCAAGGAAGACAAGATAAAGATGGTTGTACCCCGTTGCATTGGGCAGCATTAAGAGGACATTCAGAGGCATGTGCTGTGCTTGTGCATGCTGGGACAAAGGAAGAATTGACGGTGAAGGACAATGCAGGATTCACTCCTGTACAGCTTGCATTTGATAAAGGTCATCGACATGTCGCCCCTTTCCTTGCTAATCAACAACGGTCTCATAACAACCCCTGGAGACGCAAACTTTATTGTGGGATGGTAACAGATATTGGTTATGCTCCCATTTTATTGTGTGTTATAGTCTCTCTCTCTATCCTCTTCGTCCATTCAGTTGTTGCAGCTCCTAACCTTAAAAAGATAACCGCCGCTGTTGGATTTTGGTCATGGATAGCTATATCTTCTTCTGCTGCTTCCTTGGTTATGTTTTATAGGTGTAGTAGTAAAGATCCAGGTTATATAAAACGGCCAGGAGAGGGTACTCTAAGCGATACAGAGGATCCTTTGTTGAATATTGAGCTGAATAGTTCCTCTGTTTGGATGGGAAATTGGTCTCAACTCTGCCCTACCTGCAAGATCATAAGACCTGTCCGCTCTAAGCATTGCCCTACTTGTAAGCGTTGTGTAGAGCAGTTCGACCACCATTGTCCATGGATATCTAATTGTGTTGGGAAGAGGAACAAAAGGGATTTCTTTATTTTTATCTGCTTGGGAACTATAACTGCCTCCTCCAGTGCTGTCGTTGCAATTCATAGAATTTGGACATCAATACCAGCATTACCGGCAGGAGAAACATGGATCCATCAGGTATTAGTAAGACATCCAGGTCTTGTTGCTTTTTTGGTGATGGATGCTGTTGTCTTCGTTGCAACTACAACTTTGACAGTAACACAGGCTTCCATGATAGCACGAAATGTGACCACAAACGAAATAGCAAATTCCTCACGGTATGAGTACCTTCGCGGTCCTGATGGGAAGTTCAGAAACCCATATAATCATGGTTGGTGGAAGAACTGTGCTGATTTCCTTTTTCTGGGCCACACAGATGATGATGATATTGCTTGGCCTCCATTACAGCAGGTGGCTACTTAG 1626 0.4317 MTSSEIEVVSSDSKPQQQQQQQQPPILDVFTASIHGDLQKLRTFVEQDGASVSLPDINGYYALQWASLNNFHDIVHYLIQHGSNVNAKDNMQQTALHWAAVRGSIAAADVLLENGARVEASDINGYRAVHVAAQYGQTAFLNHIVVKYHADFDVPDNDGRSPLHWAAYKGYADATRLLLFRDASQGRQDKDGCTPLHWAALRGHSEACAVLVHAGTKEELTVKDNAGFTPVQLAFDKGHRHVAPFLANQQRSHNNPWRRKLYCGMVTDIGYAPILLCVIVSLSILFVHSVVAAPNLKKITAAVGFWSWIAISSSAASLVMFYRCSSKDPGYIKRPGEGTLSDTEDPLLNIELNSSSVWMGNWSQLCPTCKIIRPVRSKHCPTCKRCVEQFDHHCPWISNCVGKRNKRDFFIFICLGTITASSSAVVAIHRIWTSIPALPAGETWIHQVLVRHPGLVAFLVMDAVVFVATTTLTVTQASMIARNVTTNEIANSSRYEYLRGPDGKFRNPYNHGWWKNCADFLFLGHTDDDDIAWPPLQQVAT* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1730 541 ProSiteProfiles Ankyrin repeat region circular profile. 158 184 - -
Tpr3g1730 541 Pfam Ankyrin repeats (3 copies) 36 122 IPR002110 GO:0005515
Tpr3g1730 541 Pfam Ankyrin repeats (3 copies) 191 249 IPR002110 GO:0005515
Tpr3g1730 541 ProSiteProfiles Ankyrin repeat region circular profile. 91 122 - -
Tpr3g1730 541 PANTHER PROTEIN S-ACYLTRANSFERASE 24 3 530 - -
Tpr3g1730 541 Gene3D - 2 143 IPR036770 -
Tpr3g1730 541 ProSiteProfiles Ankyrin repeat profile. 191 223 IPR002110 GO:0005515
Tpr3g1730 541 Pfam Ankyrin repeat 158 179 IPR002110 GO:0005515
Tpr3g1730 541 Gene3D - 196 249 IPR036770 -
Tpr3g1730 541 SUPERFAMILY Ankyrin repeat 30 248 IPR036770 -
Tpr3g1730 541 Pfam DHHC palmitoyltransferase 364 491 IPR001594 GO:0016409
Tpr3g1730 541 ProSiteProfiles Ankyrin repeat profile. 124 157 IPR002110 GO:0005515
Tpr3g1730 541 ProSiteProfiles Ankyrin repeat profile. 58 90 IPR002110 GO:0005515
Tpr3g1730 541 MobiDBLite consensus disorder prediction 1 24 - -
Tpr3g1730 541 ProSiteProfiles Ankyrin repeat region circular profile. 58 90 - -
Tpr3g1730 541 ProSiteProfiles Ankyrin repeat region circular profile. 191 215 - -
Tpr3g1730 541 ProSiteProfiles Ankyrin repeat profile. 91 123 IPR002110 GO:0005515
Tpr3g1730 541 ProSiteProfiles DHHC domain profile. 364 414 - -
Tpr3g1730 541 Gene3D - 144 195 IPR036770 -
Tpr3g1730 541 PANTHER - 3 530 - -
Tpr3g1730 541 SMART ANK_2a 91 120 IPR002110 GO:0005515
Tpr3g1730 541 SMART ANK_2a 58 87 IPR002110 GO:0005515
Tpr3g1730 541 SMART ANK_2a 158 187 IPR002110 GO:0005515
Tpr3g1730 541 SMART ANK_2a 124 154 IPR002110 GO:0005515
Tpr3g1730 541 SMART ANK_2a 191 222 IPR002110 GO:0005515
Tpr3g1730 541 SMART ANK_2a 226 255 IPR002110 GO:0005515
Tpr3g1730 541 ProSiteProfiles Ankyrin repeat profile. 158 190 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1730 Tpr-Chr3 15329127 15340590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1730 36 259 Miscellaneous Gene Families AT2G31820 25.641 9.92e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1730 K20032 - gmx:100807263 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1730 3 15329127 15340590 Tpr3g1730 3 15329127 15340590 ECH