Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1636 ATGAATAATGAAATGGATCCACCAAAGAAGAAACACCATGTAGTTTGTATTCCTCTCCCAGCACAAGGTCACATAAATCCAATGCTAAAACTAGCAAAACTCCTTCATCATAGTGGCTTCTACATAACCTTTGTCCACACAAAATTCAATTTTGACCGATTGATGAAATCCAATGGCTCAAATTCCTTAAAGGGTCTTCCAGATTTTAGATTTGAGACCATATCTGATGGATTGCCAGCAGAGAATCAAAGAGGAATAATGGACCTACCAGATTTGTGCATAGCAATGCCATTTGGTGGGTTGGTTTCATTTAGAAATCTTATAGCAAAGCTTGTTTCTTCAGAAAATGAAGATGTGCCACCAGTTACTTGCATAGTTTCTGATGGTGTGATGAATTTTACTTTGAAAGTTGCTCAAGAATTTAATATTCCTGAGTTCATGTTGTATACTCCTAGTGGTTGTGGTATGTTGGGGTATCTTAACTTTGAAGAGCTTGTCAAAAGAGGATATTTTCCACTTAAAGATGAGAAGAATTTATGTGATGGATATCTTGAAACTGAAGTTGATTGGATACCAGCAATGAAAGGTGTTAAACTAAAAGACCTTCCCACTTTCTTTAGGACTACAAATTCTAATGATACAATGTTCAATTATAACAAAGAATCAGTGAGCAATGCAATAAAATCAAAAGGGATAATTCTTAACACCTTTGAAGAATTAGAATCAGAGGTATTAGATGCAATCAAAATCAAATTCCCTAACCTCTACCCTATTGGTCCATTATCATTGCTACATAAAAAAAATTCATCAAATTCAAATAATCAATTGGAGTCCATTGATTTTAATTTATGGAAGGAAGATGTTAATTGCATAAAATGGTTAGATAAAATGGAGAAAGGTTCAGTGGTTTATGTGAATTTTGGAAGCTTAGTGATTATGACTAAAAACCAATTAAAAGAATTTGCATGGGGATTAGCTAATAGTAACTACAATTTTTTATGGATTATTAGACCTAATCTTGTGGATTGTGGGGATGAGGTGATATCAAATGATGAATTTGTTCAAGAAATTGAAAATAGAGGATTAATATTGGGGTGGTCGCCACAAGAGAAGGTTCTAGGTCATTCATCTATCGGAGGATTCTTAACACATTGCGGATGGAACTCAACGTTGGAAAGTATTTGTGAGGGTGTCCCAATGGCTTGTTGGCCTTTTTTTGCCGAGCAACAAACAAATTGTTTTTATGCATGTAATAGATGGGGGGTGGGAATAGAAATTGAGAGTGATGTTAATAGAGAACAAGTTGAAGGGCTAGTGAAGGAGCTTATGGGGGGTGAGAAAGGGAAAGAAATGAAGAAAAAGTGTGTTGATTGGAAGCATAAGGCTGAGGCTGCTACATCAATTGGAGGGTCTTCTTATGATAACTATAATAGTTTGGTTTTGCAATTGAAGTTTGGTCAATAA 1464 0.3518 MNNEMDPPKKKHHVVCIPLPAQGHINPMLKLAKLLHHSGFYITFVHTKFNFDRLMKSNGSNSLKGLPDFRFETISDGLPAENQRGIMDLPDLCIAMPFGGLVSFRNLIAKLVSSENEDVPPVTCIVSDGVMNFTLKVAQEFNIPEFMLYTPSGCGMLGYLNFEELVKRGYFPLKDEKNLCDGYLETEVDWIPAMKGVKLKDLPTFFRTTNSNDTMFNYNKESVSNAIKSKGIILNTFEELESEVLDAIKIKFPNLYPIGPLSLLHKKNSSNSNNQLESIDFNLWKEDVNCIKWLDKMEKGSVVYVNFGSLVIMTKNQLKEFAWGLANSNYNFLWIIRPNLVDCGDEVISNDEFVQEIENRGLILGWSPQEKVLGHSSIGGFLTHCGWNSTLESICEGVPMACWPFFAEQQTNCFYACNRWGVGIEIESDVNREQVEGLVKELMGGEKGKEMKKKCVDWKHKAEAATSIGGSSYDNYNSLVLQLKFGQ* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1636 487 CDD GT1_Gtf-like 13 442 IPR002213 GO:0008194
Tpr3g1636 487 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 10 483 - -
Tpr3g1636 487 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 301 450 IPR002213 GO:0008194
Tpr3g1636 487 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 483 - -
Tpr3g1636 487 ProSitePatterns UDP-glycosyltransferases signature. 366 409 IPR035595 -
Tpr3g1636 487 PANTHER GLYCOSYLTRANSFERASE 10 483 - -
Tpr3g1636 487 Gene3D Glycogen Phosphorylase B; 285 464 - -
Tpr3g1636 487 Gene3D Glycogen Phosphorylase B; 13 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1636 Tpr-Chr3 14543941 14547260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1636 9 487 Glycosyltransferase AT1G22380 50.208 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1636 - - cam:101501400 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1636 3 14543941 14547260 Tpr3g1636 3 14543941 14547260 ECH