Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1332 ATGGCTCCGAAGCCGAAACCGACGCCGTCGCAGCCTCCAGCTCCACCTCCACTCGAAGATCTCTTCACCACACTCAACAAGCACATTCAATCTTCCTCATTCACCAATGCCGTTAAACTCACAGATCAGATTCTCGCGATTGCACCTGGCGATGAAGACGCTCTCCGATGCAAGATCGTCGCACTGATCAAAGATGATCGATTCGATGATGCTATCTCCGCTATTCAATCTTCTCGGACTCCTCCTGAGGATTTTCATTTCCTTAAGGCATACTGCTTATACAAACAAAACAAGTTGGATGAAGCTTTGGAGTCTTTGCAAAAACATGAGAGAAATGATGAAACTGCGCTTTTGGAATCTCAAATTTTGTATCGTCTTGGAAAAATGGATGCATGCTTAGATATCTACCAGAAGCTTCAAAAGTCCAAGATTGATATGTTGGAAATAAATTCTGTTGCTGCCTTAGTTATGGCAGGGAGATCATCTGAAGTTCAAGGATGGCTGGATTCATTTCGGGTTAAAGCAACAAGCAGCTTTGAATTGGCATACAATACTGCTTGTTCTTTAATTCAAAGGGATAAGTACACAGATGCTGAACAACTCTTGCTGTCTGGCCGAAGAATTGGTCAAGAGAGCCTGATGGAAGATAACTGGCCTGATGAAGATATAGAAAATGAATTGTCTCCTATTGCTGTACAATTGGGCTATGTCCAACAGCTACTTGGGCGTAAACAAGATGCTATTGAAGCTTACGTGGACATGATTAAACGAGATATGGCCGATGAATCATCCATTGCAGTGGCAATCAATAATCTTGTTTCACTGAAAGGTCCAAAAGATGTTTCTGATAGCCTGAAGAAACTTGATCGGCTAAAAGAGAAAGAGATACAAAGCTTTCGCCTAGCTCATGGATTGGACTTGAAACTTTCAGCAAAAGAAAAGGAAGCAATATATGCAAATAGGGTTCTTTTGCTTATTCATGCTAACAAGATTGACCAGGCTCGAGAACTTGTTTCTGCATTGCCTGACATGTTTCCTGAAAGTATTGTTCCAGTATTGCTGCAAGCTGCCCTCTTGGTTAGAGAGAACAAAGCTGGTAGGGCTGAGGAAATACTGGCACAGTTTGCTGGAAAGTTCCCTGAGAAGTCCCAGCTTCTTTATTTAGCCAGGGCTCAGGTTGCGGCGGCGGCTGGCCACCCACATATTGCAGCTGATTCTCTCACTAAGATACCGGATATTCAACACATGCCAGCTACTGTTGCCACCCTTGTGTCTTTAAAAGAGCGAGCCAACGACGTTGAAGGTGCAGCTGTTGTGCTTGATTCAGCAACCAAATGGTGGTCTAATGCTATGACCGAGGACAATAAGCTTAATATTATAACGCAAGAAGCTGCCTCATTCAAGCTAAGGCATGGAAGGGAAGAGGATGCTGCTAAACTTTTTGAGGAGCTGGTTAAAAGTCAGGGAAGCATAGAAGCACTAGTTGGGCTGATAACAACAGTTGCGCGTCTTGATGTTGTTAAGGCAGAGCTATACGAAAAGCAACTAAAGACCTTACCTGGATTGAAGGGAATTGATGTAGACAGCTTGGAGCGTACTTCTGGAGTTAAACGAGTTGAGGGTCCTCCACATGCAGGTGTTGCTGAAACGAACGAGGAAGGAAAGAATAAGACAAAAACTAAGAAAAAGAGAAAGAGAAAGCCAAGGTATCCTAAAGGGTTTAACCCAGCAAACCCAGGTCCTCCACCAGATCCTGAAAGGTGGCTTCCCAAGCGAGAGAGGTCAACTTTTAGGCCAAAGAGGAAGGACAAAAGAGCTGCTCAGGTGAGAGGCTCACAGGGTGCTGTAGTTAGAGACAAGCACGACGCTAGTGCTTCGTCTAATCAATCAAATCCAAAGTCAAACCAGGCAACTACCTCCAAAGGTGCTGCCCAGAGTGCAGTTTCTGAGCAAGCCAAGCCTTCATCCAAGTCAAGAAAGAAGTCTAGGAAGTAG 1995 0.4436 MAPKPKPTPSQPPAPPPLEDLFTTLNKHIQSSSFTNAVKLTDQILAIAPGDEDALRCKIVALIKDDRFDDAISAIQSSRTPPEDFHFLKAYCLYKQNKLDEALESLQKHERNDETALLESQILYRLGKMDACLDIYQKLQKSKIDMLEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIQRDKYTDAEQLLLSGRRIGQESLMEDNWPDEDIENELSPIAVQLGYVQQLLGRKQDAIEAYVDMIKRDMADESSIAVAINNLVSLKGPKDVSDSLKKLDRLKEKEIQSFRLAHGLDLKLSAKEKEAIYANRVLLLIHANKIDQARELVSALPDMFPESIVPVLLQAALLVRENKAGRAEEILAQFAGKFPEKSQLLYLARAQVAAAAGHPHIAADSLTKIPDIQHMPATVATLVSLKERANDVEGAAVVLDSATKWWSNAMTEDNKLNIITQEAASFKLRHGREEDAAKLFEELVKSQGSIEALVGLITTVARLDVVKAELYEKQLKTLPGLKGIDVDSLERTSGVKRVEGPPHAGVAETNEEGKNKTKTKKKRKRKPRYPKGFNPANPGPPPDPERWLPKRERSTFRPKRKDKRAAQVRGSQGAVVRDKHDASASSNQSNPKSNQATTSKGAAQSAVSEQAKPSSKSRKKSRK* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1332 664 PIRSF SRP72 10 664 IPR026270 GO:0006614
Tpr3g1332 664 SUPERFAMILY TPR-like 232 486 IPR011990 GO:0005515
Tpr3g1332 664 Gene3D Tetratricopeptide repeat domain 174 515 IPR011990 GO:0005515
Tpr3g1332 664 PANTHER SIGNAL RECOGNITION PARTICLE 72 11 662 IPR026270 GO:0006614
Tpr3g1332 664 MobiDBLite consensus disorder prediction 622 653 - -
Tpr3g1332 664 Pfam SRP72 RNA-binding domain 551 599 IPR013699 GO:0006614|GO:0008312|GO:0048500
Tpr3g1332 664 Pfam Putative TPR-like repeat 55 153 IPR031545 -
Tpr3g1332 664 Gene3D Tetratricopeptide repeat domain 18 166 IPR011990 GO:0005515
Tpr3g1332 664 MobiDBLite consensus disorder prediction 534 664 - -
Tpr3g1332 664 SUPERFAMILY TPR-like 20 202 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1332 Tpr-Chr3 11795059 11799234 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1332 K03108 - gmx:100810125 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1332 3 11795059 11799234 Tpr3g1332 3 11795059 11799234 ECH