Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1331 ATGGCATTGAATTTCTCTCATCGGCCAATTTTTCCGAGTGGTTTGTCTGAGGATAACTTGGTTTTGCCGATGAGAATGGGGAACGGGTACCGAGTAGAGGGTCTTCCTGAGAAGAGTGGTGGTAGTGGTAGTGGTAGTGGGGATGGATTTGGTAATGGGTGGCGTGATGTTGATAATTGTTCTGTATCTAAGGACATTCTTGATCTTTTGCCTTCGGATCCTTTTGGGATGGATATCAGTACTACCTTCACAGCCATCACCGGATGGTTGGAAGATTTGGATTTGGATTTTGATTATGGTGGGTATCGGCGAGATGAGATTGGAGCCAGTGGCGAGAATTATCCTTTGTTTGCTGGGTTGAATTTCATTTGGAATAATGCTGTAAGGTTCCACAACTTTCCTTCCCAAGGGGGGAGTGTGTGCATTGACGAGAAGATTTCTCAAGGGGTGAGTGGATTCGGTGAGTGTTCTCGTAGAGAAGTTGGAGAACCATCCTGCAGCTATGGTTCTGGATCTTCTTGTGACATGGATGGCGTTTTAGGTTTTAGGTGTGGTTATAAAGATGTAGCTGTTGCTAGCGTGTCAGGTGACACAAACATGGATGATGTGAATTGCTCTGAAGAAGACGAACGCTCTCCTCATCCGGCTATAGCACTTTCTCTTGCATATTTGAGTTTGTCTGATCTTCTTGTTGTTGAGAGAGTATGTAAATATCTGCGTAATGTTGTTCGAGATGATACGCTTCTGTGGAAGACTGTCCATGTTGACCAGCCTTTAAATGAAAGGATCACTGATGACATTCTTTTCGAATTAACCAGAAGGGCTCAAGGTAAACTTCTCTGCCTGAGCCTGGTGGAATGTACTTGGATAACTGATGATGGCCTGAGGCGTATTCTTGAGGCCAATCCCACAATAATCAAGCTGAGTGTTCCTGGATGTACAAGACTTAGTATTGAAGGTATTGTGGGTATGTTAAAAAATCACAACTCTAAGGAGGGTACACAAGGGGTGAAGCATTTACACATAGGCGGCCTCTATGGTGTTACACAAAAGCATTTTGAAGAAATAAAACTCTTGTTGGAGCATTCTAAGAAATCGGACTTGTTGGGCACCGACAGTCAACTGCAGGAGCATGCTAAGAAATCGGACTTGTTGGGTACTGACGGTCAACCGAAGAAGCATTCTCACAAACCGCACTTCTATTGCCGTTGGAAGTTGTATCGGCCCTTCGATGATGATCGGTCCTTAGATATTGAAGTTTGTCCTCGATGTCAGAATTTAAGGCTTATATATGATTGTCCTGCAGAAAGCTGTCAACGGTTGGTAGGAAACGCCACTCAGGCCTGTAGGGCTTGCACTCTTTGCATACCGCGATGTAGTCAGTGTGGCCGCTGCATCAATGACAGCGAGTATGAAGAAACATTTTGTCTGGAATTGCTTTGCTCTTTTTGTTCTCAGCCTTTGGTCAAATTGTTGGGAAGGACGGATGGAAAGGCCGGGCTTGTCAGCTCAGTTCTCCCTGAGCAAAGTTAG 1533 0.4481 MALNFSHRPIFPSGLSEDNLVLPMRMGNGYRVEGLPEKSGGSGSGSGDGFGNGWRDVDNCSVSKDILDLLPSDPFGMDISTTFTAITGWLEDLDLDFDYGGYRRDEIGASGENYPLFAGLNFIWNNAVRFHNFPSQGGSVCIDEKISQGVSGFGECSRREVGEPSCSYGSGSSCDMDGVLGFRCGYKDVAVASVSGDTNMDDVNCSEEDERSPHPAIALSLAYLSLSDLLVVERVCKYLRNVVRDDTLLWKTVHVDQPLNERITDDILFELTRRAQGKLLCLSLVECTWITDDGLRRILEANPTIIKLSVPGCTRLSIEGIVGMLKNHNSKEGTQGVKHLHIGGLYGVTQKHFEEIKLLLEHSKKSDLLGTDSQLQEHAKKSDLLGTDGQPKKHSHKPHFYCRWKLYRPFDDDRSLDIEVCPRCQNLRLIYDCPAESCQRLVGNATQACRACTLCIPRCSQCGRCINDSEYEETFCLELLCSFCSQPLVKLLGRTDGKAGLVSSVLPEQS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1331 510 ProSiteProfiles F-box domain profile. 206 253 IPR001810 GO:0005515
Tpr3g1331 510 SUPERFAMILY F-box domain 221 253 IPR036047 GO:0005515
Tpr3g1331 510 Gene3D Ribonuclease Inhibitor 216 385 IPR032675 -
Tpr3g1331 510 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 1 493 - -
Tpr3g1331 510 PANTHER F-BOX PROTEIN SKIP14 1 493 - -
Tpr3g1331 510 Pfam F-box-like 222 254 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1331 Tpr-Chr3 11786704 11790621 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1331 - - mtr:MTR_8g080000 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1331 3 11786704 11790621 Tpr3g1331 3 11786704 11790621 ECH