Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1328 ATGGCACCTTCTTACTTTCCTCTTCGTTGGGAAAGCACAGGAGATCAATGGTGGTATGCAACACCTATTGATTTAGCAGCTGCAAATGGTCTCTATGATTTAGTAACTGAGCTTCTTCATCAAGATACAAATAATCTCATTAAACTCACTTCTCTTCGTAGAATTCGTCGACTCGAAACAGTTTGGGATGATGATGAGTCTCAGTTTCAAGATGTTGCTAAGTGTAGGTCTTATGTTGCAAGGAAGCTTTTGTTTGAGTGTGAAGAAACAGGAACAGGAAAGAATTCTCTTATTAATGGTGGATATGGTGGTTGGCTTTTGTATACTGCTGCTTCTGCTGGTGATTTAGAGTTTGTTCATGAATTGTTGAGAAGAGATTCTTTGTTGGTTTTTGGTGAAGGAGAGTATGGTGTTACTGATATGCTTTATGCTGCAGCTAGGAGTAAGAATTTTGAGGATTGGCTTCCTGTCACTGCCTCGAGAAAAGCCAAATGGTGGTACTCCGCTTTTCACAATATCACAGCCATGGTTGGCGCCGGCGTTCTCACCCTTCCTTACGCCATGTCTAAGATGGGATGGGGACCAGGGGCAGTAATATTGTTATTATCATGGATAATCACATTGTTCACACTATGGCAAATGGTTGAGATGCATGAAATGGTACCAGGTGTGAGATTTGACAGGTATCATGAACTTGGTCAACATGCTTTTGGTGAAAAGTTAGGTCTATACATCATTGTTCCTCAACAACTACTTGTTGAAGTTGGAACTTGCATTGCTTATATGGTTACTGGAGGAAAATCAATGAAGAAGGTTCAAGAAACTCTTTGTCCTACATGTACACGCATCAGAACCTCCTATTGGATTGTTATCTTTAGTTCTATAAACTTTGTGCTATGTCAATGCCCCAGCTTCAACTCTATTTCTGCTGTCTCTCTTGCTGCAGCTGTCATGTCTATTGCATACTCAACAATTGCTTGGGTGGCTTCACTTCAAAAAGGAGTTCAACCAGGAGTGGACTATAGTTACAATGCTCATAGCACTATAGATGGTGTATTCTACTTCTTTGTTGCTATGGGAGAAGTAGCATTTTCTTATGCAGGTCATAATGTAGTTCTTGAAATCCAAGCAACGATACCTTCTACGCCTGAGAACCCTTCAAAGAAAGCAATGTGGAAAGGAGTAGTTGTTGCATATATAGGAGTGGCCTTTTGTTACCTCCCAGTTGCATTTGTTGGATATTATGTGTTTGGAAATACCGTTGATGATAACATACTCATCACACTAGAACGCCCTCCATGGCTTATTGCTGCTGCTAATATATTTGTTGTTATTCACGTTGTTGGTGGCTATCAGGTATTCTCAATGCCGGTGTTCGATATGATTGAAACATTTTTGGTGAAGCAGATAAAACTTCCTCCTTGTTTTATACTTCGATTCTGTGCTCGAACTATATTCGTTGCCATGACTATGATAATTGGAATATGCATTCCATTCTTTGGTTCTCTTCTTGGATTTCTAGGAGGATTTGCCTTTGCACCAACATCATACTTTATTCCATGTATCATATGGCTCAAACTTTACAAACCGAAGAGATTTGGCTTGTCTTGGATAATCAACTGGACCTGCATTGTTCTTGGGACGTTGTTGATGATACTAGCTCCAATAGGTTCATTGAGACAAATTATTATTCAATTCAAGGATTACAAATTCTTCTCATAA 1722 0.3955 MAPSYFPLRWESTGDQWWYATPIDLAAANGLYDLVTELLHQDTNNLIKLTSLRRIRRLETVWDDDESQFQDVAKCRSYVARKLLFECEETGTGKNSLINGGYGGWLLYTAASAGDLEFVHELLRRDSLLVFGEGEYGVTDMLYAAARSKNFEDWLPVTASRKAKWWYSAFHNITAMVGAGVLTLPYAMSKMGWGPGAVILLLSWIITLFTLWQMVEMHEMVPGVRFDRYHELGQHAFGEKLGLYIIVPQQLLVEVGTCIAYMVTGGKSMKKVQETLCPTCTRIRTSYWIVIFSSINFVLCQCPSFNSISAVSLAAAVMSIAYSTIAWVASLQKGVQPGVDYSYNAHSTIDGVFYFFVAMGEVAFSYAGHNVVLEIQATIPSTPENPSKKAMWKGVVVAYIGVAFCYLPVAFVGYYVFGNTVDDNILITLERPPWLIAAANIFVVIHVVGGYQVFSMPVFDMIETFLVKQIKLPPCFILRFCARTIFVAMTMIIGICIPFFGSLLGFLGGFAFAPTSYFIPCIIWLKLYKPKRFGLSWIINWTCIVLGTLLMILAPIGSLRQIIIQFKDYKFFS* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1328 573 Pfam Transmembrane amino acid transporter protein 162 557 IPR013057 -
Tpr3g1328 573 Gene3D Amino acid/polyamine transporter I 158 566 - -
Tpr3g1328 573 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 142 568 - -
Tpr3g1328 573 PANTHER OS05G0424000 PROTEIN-RELATED 142 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1328 Tpr-Chr3 11758931 11766056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1328 132 573 Organic Solute Cotransporters AT1G24400 69.231 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1328 - - gmx:100809608 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1328 3 11758931 11766056 Tpr3g1328 3 11758931 11766056 ECH
Tpr2g4697 2 52326410 52331206 Tpr3g1328 3 11758931 11766056 PCT