Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1316 ATGATCTTGACTACTGAGTTCTTAAAATCAAAGGGGGATGTCAGTGGTTATGGAGGGGACTGGGCAGTTCGAATTGATGTGCAGGTTGATAAGTCTAAGTGGAATGAAGAATTTGGGAGAGATGCCCAGCTCTTTTTCTATTTGGCTGATGAAGGTGGTAATGTTCTTGATGTAGGTAGAGAAAAATTGAACATTCGCGAGAGTTCATTACTTGCATCTGGCTCTCGAACAGACATTGGAGACTGGCAGCTACATTTAAAGTCAATGGATGATCTAAAGCTGCATTACTCTGGATTTCACACACCTCACTTTCACAATTTGTCTGATCTTGTTGAGGGAAACCTTGCATCACAAACAAGAAAGCATGGTCAAGTGCAGCTATCTGACTCATCAGATGATTCTCCTAATGTGTTAGCTTTTCAGATTATTGGTGGCTTTCCTTTCACTACAGATATCGTGTTTATCTCTGGAACTGATTCAGAAAATTCAATAGTAGAAGAGCGCGTCAATAGTCTTGCAGGAGCCTCACTGTCAAATGAACTGAAATATAAAGAACAAGCATATGATGAAAAGATTGAGAAAGTTTTCAATTTGGCGGAGAAGGTGGATTCGGATTCCATTTCTGTTGGTAAGGCTGCGGTTGGAAACTTATTAGGTGGCATCGGTTACTTCTATGGCCAGTCAAAAATTGCTCTGTCAAGAACCCTGAATGATAGAGAACATGTTGATTATCTATCATATTGGCCTGCTGAGCTTTACACAGCTGTGCCATGTCGACCAATCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTGTAATCTGTCGTTGGGATGTTCATATTTCATTGGATATCATTGGACACTGGCTAGATTTGATGAACATTGATGGATGGATGCCGCGAGAACAAATTCTGGGGGCTGAAGCACTAAGTAGGATCCCACAGGAATATGTTGCTCAGCATCCAACAAATGGAAATCCTCCAACTCTGTTTTTAGCATTAAGTGGTATAATCAATGCTTTGAAGAATAATGAGTTTAATGCGATGGATAGAAGCGAGATTTCTCTGTTTATGGAGCGTGCCTTTGGTCGATTAGAAGCATGGTTTCAATGGCTTAATAATACTCAATCAGGGGAACAGATGAGCAGCTACTATTGGCGTGGACGGGACAATAGGACAATATTTGAATTAAATCCCCAGACACTGTCCTCAGGATTTGATGACTATCCACGTGCTTCTCACCCAAGTGCAGATGAACGCCATCTGGATCTTAGATGTTGGGTGTTACTTGCAGCAGAATGTATGCATTCCATTGAAGAGTTGTTGAATAAGGAAACCAAACCTGGAAAGAATTATGGTTCCACTGTGAAATTGCTAACAGATCTAGAGTTATTGAACAAGATGCATTTTGATGAGGCATATGGTGCTTACTTTGACTTTGGAAATCATACGGAAAAGGTTCGACTTGAATGGAAAGAATTAAAAGCAGGACACAATCATGCGACTCGCCAGCTTGTCCGAGAAGTTTCGGAGAGGCCTGTATTGAGCTTGGTTCCTCATATTGGTTATGTTAGTTTCTTCCCATTCATGGGGAGAATCATTCCATCTGGATCATGGATCCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCAATTATGGACTGACTATGGACTACGTTCTCTTGCCAAAACAAGTTCCTTGTACATGAAGTACAACACAGAACATGATGCTCCATATTGGAGAGAGAATGGACCATATCAGGACAAAGCCAAAGTCATCTACAAAGAATTGAGGAGCAATTTAATTAGAAATATGGTGCACAATTATCATCAGACTGGATTTTTGTGGGAGCAGTACGATCAGGTTAAGGGGAACGGGAAAGGGGCACATCCATTTACAGGTTGGACATCGGTTGTAGTGTTAATCATGGCGGAAGCATATGACACAATTTAG 1968 0.4101 MILTTEFLKSKGDVSGYGGDWAVRIDVQVDKSKWNEEFGRDAQLFFYLADEGGNVLDVGREKLNIRESSLLASGSRTDIGDWQLHLKSMDDLKLHYSGFHTPHFHNLSDLVEGNLASQTRKHGQVQLSDSSDDSPNVLAFQIIGGFPFTTDIVFISGTDSENSIVEERVNSLAGASLSNELKYKEQAYDEKIEKVFNLAEKVDSDSISVGKAAVGNLLGGIGYFYGQSKIALSRTLNDREHVDYLSYWPAELYTAVPCRPIFPRGFLWDEGFHQLVICRWDVHISLDIIGHWLDLMNIDGWMPREQILGAEALSRIPQEYVAQHPTNGNPPTLFLALSGIINALKNNEFNAMDRSEISLFMERAFGRLEAWFQWLNNTQSGEQMSSYYWRGRDNRTIFELNPQTLSSGFDDYPRASHPSADERHLDLRCWVLLAAECMHSIEELLNKETKPGKNYGSTVKLLTDLELLNKMHFDEAYGAYFDFGNHTEKVRLEWKELKAGHNHATRQLVREVSERPVLSLVPHIGYVSFFPFMGRIIPSGSWILEKQLELISNRSQLWTDYGLRSLAKTSSLYMKYNTEHDAPYWRENGPYQDKAKVIYKELRSNLIRNMVHNYHQTGFLWEQYDQVKGNGKGAHPFTGWTSVVVLIMAEAYDTI* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1316 655 SUPERFAMILY Six-hairpin glycosidases 184 652 IPR008928 GO:0005975
Tpr3g1316 655 Gene3D - 1 199 IPR038518 -
Tpr3g1316 655 PANTHER ALPHA-GLUCOSIDASE 2 1 653 - -
Tpr3g1316 655 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 1 653 IPR004888 GO:0004573|GO:0009311
Tpr3g1316 655 Pfam Glycosyl hydrolase family 63 N-terminal domain 3 95 IPR031631 -
Tpr3g1316 655 Pfam Glycosyl hydrolase family 63 C-terminal domain 174 587 IPR031335 -
Tpr3g1316 655 Gene3D - 200 654 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1316 Tpr-Chr3 11651894 11661621 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1316 31 652 Glycoside Hydrolase AT1G67490 61.742 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1316 K01228 - gmx:100795161 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1316 3 11651894 11661621 Tpr3g1316 3 11651894 11661621 ECH