Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1309 ATGTATGGTAAAGTGGTTCTGACATTCATATTCGTCTTCCTTCTCCTAATTTCCTACTCAATTTTCATCGGCACTCTCGACATTCGATCTTATTTCTTCCAATCACCAGTTTTCCAACCCGTAACATGTAAACCCGACCCGCCTATTCGTCTCTACATGTACGATCTCCCTCCTCGTTTCAATGTCCAAATGATTAACCGTCGGATTCAATCTCAATCTCCTGTTACCGCCAAAGACTTTCCGCGGTGGCCGGATAATTGGGGACTTAAGAAGCAACATAGCGTTGAGTATTGGATGATGGGATCGCTTATACATGAAGATGATGATGATGATGGTGAGTCTAGAGAAGCTATCAGGGTTTTGGATCCGGAATTGGCGGATGCTTTTTTTGTTCCGTTTTTTTCTTCCTTGAGTTTTAATACGCATGGCCATACTATGACGGATCCTGCTACTGAGATTGATCGCCAATTGCAGGTTGATCTGATGGAATTATTGAAGAAATCCAAATATTGGGAGAGGTCTAAAGGCAGAGACCACATATTACCTATGACACACCCCAATGCCTTTAGGTTCCTACGAAATCAAGTGAACGATACTATTCAAGTTGTCGTGGATTTTGGCCGGTACCCCAAGGGCATGTCTAATTTGAACAAAGATGTGGTGTCCCCGTATGTGCATGTTGTGGATTCTTTTACTGATGATGAATCTCAAGATCCGTATGAGGCTCGTTCTACACTGCTTTTCTTTCGAGGGAGGACTTACAGGAAGGATGAAGGCATTGTCCGTGCTAAACTGGCAAAGATATTGACTAATTATAGTGACGTTCACTATGAGCGAAGTGTTGCAACCGAAGAAAACATAAAAGCGTCATCTAAAGGGATGCGTTCATCAAAGTTCTGTTTGGATCCAGCAGGAGACACACCATCATCTTGTCGCCTTTTTGATGCCATCGCGAGTCACTGTGTTCCAGTCATTGTGAGTGACCAAATTGAACTCCCCTTTGAGGATGAGATTGATTACTCCCAGTTCACGTTATTCTTCTCTTTCAAAGAGGCACTACAGCCTGACTACATGATCGACCAGCTTCGTAAATTTCCAAAGCAGAATTGGACTGAAATGTGGAGGCAGCTTAAAAGCATCTCCCATCATTATGAATTCCATTACCCTCCAAAAAGAGAGGATGCTGTTAATATGCTATGGAGACAGGTCAAACACAAGCTTCCATCGGTCAGACTCTCTATTCATAGAAACCGAAGGTTAAAAATCTCAGATTGGTGGCGGAAGAGATGA 1290 0.4295 MYGKVVLTFIFVFLLLISYSIFIGTLDIRSYFFQSPVFQPVTCKPDPPIRLYMYDLPPRFNVQMINRRIQSQSPVTAKDFPRWPDNWGLKKQHSVEYWMMGSLIHEDDDDDGESREAIRVLDPELADAFFVPFFSSLSFNTHGHTMTDPATEIDRQLQVDLMELLKKSKYWERSKGRDHILPMTHPNAFRFLRNQVNDTIQVVVDFGRYPKGMSNLNKDVVSPYVHVVDSFTDDESQDPYEARSTLLFFRGRTYRKDEGIVRAKLAKILTNYSDVHYERSVATEENIKASSKGMRSSKFCLDPAGDTPSSCRLFDAIASHCVPVIVSDQIELPFEDEIDYSQFTLFFSFKEALQPDYMIDQLRKFPKQNWTEMWRQLKSISHHYEFHYPPKREDAVNMLWRQVKHKLPSVRLSIHRNRRLKISDWWRKR* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1309 429 Pfam Exostosin family 47 358 IPR040911 -
Tpr3g1309 429 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 1 421 IPR004263 GO:0006486|GO:0016757
Tpr3g1309 429 PANTHER EXOSTOSIN-LIKE 1 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1309 Tpr-Chr3 11591162 11595020 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1309 - - mtr:MTR_8g080490 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1309 3 11591162 11595020 Tpr3g1309 3 11591162 11595020 ECH