Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1305 ATGCAACTAAACGAAAAAATGAGAAACCATTACAACCTCGTTGGTGAAAAACGTTGGTCAGTAATTCTCTTAACACTTTTAGGTATAATCGGAGCATTACTTTTCATAACAACAATACTCCAAACCTCAGACAACACCTTATTATGTTCTTTCACCCGAACCAAACTCCAAACCACAAACCAAAACACAAACCCAACACCGATCCAGCTTCGTGCGATTCTTCACTACGCAACCTCACGCGTTGTTCCACAACAATCCATCCACGAAATCAGCGTCACATTAAACGTAATCAAATCGTTAAATCGACCCTTCAACTTCCTCGTTTTCGGGTTGGGCCATGATTCACTTATGTGGGCCGGGTTTAACCCGTTAGGAAAAACTATTTTTCTTGAAGAAGATCCGAAATGGGTTCAAACTGTTCTTAAAGACGCACCGGAGTTACACGCTATAACCGTCAATTACCGGACGCAGCTTCAACAAGCCGATGAGCTTCTCAAAAGTTATAGATCGGAGCCGGAATGTTCTCCGGCGAAAGCTACGTTACGTGGAAACGAGAAATGTAAGCTAGCTCTTCATAATCTACCTGATGAGATTTATAATACTGAATGGGATTTGATAATGATCGATGCGCCGAGAGGATATTTCGCGGAGGCGCCGGGGAGAATGGCGGCGATTTTCTCGATGAATATTATGGCGAGGAATAGACAAAGTTCCGGTGTGACACACGTGTTTTTGCACGATGTGGATCGGAAGGTTGAGAAGAGTTTTGCTGAAGAGTTTCTTTGTAAAAAGAATTTGGTGAAAGGTGTTGGAAGACTTTGGCACTTTGAAATTGCTTCTGTTGTTGCTGGTAATTACACCAGTGATAATTCTATTGGTTCTGGATACTGTTAA 894 0.4217 MQLNEKMRNHYNLVGEKRWSVILLTLLGIIGALLFITTILQTSDNTLLCSFTRTKLQTTNQNTNPTPIQLRAILHYATSRVVPQQSIHEISVTLNVIKSLNRPFNFLVFGLGHDSLMWAGFNPLGKTIFLEEDPKWVQTVLKDAPELHAITVNYRTQLQQADELLKSYRSEPECSPAKATLRGNEKCKLALHNLPDEIYNTEWDLIMIDAPRGYFAEAPGRMAAIFSMNIMARNRQSSGVTHVFLHDVDRKVEKSFAEEFLCKKNLVKGVGRLWHFEIASVVAGNYTSDNSIGSGYC* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1305 297 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 71 280 IPR006514 GO:0045492
Tpr3g1305 297 Pfam Polysaccharide biosynthesis 89 276 IPR021148 -
Tpr3g1305 297 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 7 281 - -
Tpr3g1305 297 PANTHER OS11G0490100 PROTEIN 7 281 IPR006514 GO:0045492
Tpr3g1305 297 Gene3D Vaccinia Virus protein VP39 84 288 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1305 Tpr-Chr3 11510941 11512228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1305 - - pvu:PHAVU_002G173400g 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1305 3 11510941 11512228 Tpr3g1305 3 11510941 11512228 ECH
Tpr2g4659 2 51896098 51898083 Tpr3g1305 3 11510941 11512228 PCT