Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1300 ATGGATCCAGACGCGTTGGCAAAGGCATTCGTGGAGCACTACTACACCACCTTCGACACCAATCGCGGTGGACTTGCTACTCTTTACCAGGAAGGTTCTATGCTCACCTTCGAAGGTCAGAAGATTCAAGGTTCTTCCAACATCGTCGCTAAACTCACTTCTCTCCCTTTTCAGCAGTGTCATCACTCCATCACCACCGTTGATTGTCAACCTTCCGGTGTTAACGCCGGCATGCTCGTCTTCGTTAGTGGTAATCTCCAACTCGCTGGTGAACAACATGCTCTCAAATTCAGCCAGATGTTCCATTTAATACCAACACAGCAAGGAAGCTATTATGTGCTGAATGACATATTCCGTTTGAACTATGCTTGA 372 0.4704 MDPDALAKAFVEHYYTTFDTNRGGLATLYQEGSMLTFEGQKIQGSSNIVAKLTSLPFQQCHHSITTVDCQPSGVNAGMLVFVSGNLQLAGEQHALKFSQMFHLIPTQQGSYYVLNDIFRLNYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1300 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Tpr3g1300 123 Gene3D - 1 123 - -
Tpr3g1300 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Tpr3g1300 123 PANTHER NUCLEAR TRANSPORT FACTOR 2B 1 123 - -
Tpr3g1300 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Tpr3g1300 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
Tpr3g1300 123 CDD NTF2 2 122 IPR018222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1300 Tpr-Chr3 11483037 11485107 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1300 - - gmx:100777334 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1300 3 11483037 11485107 Tpr3g1300 3 11483037 11485107 ECH
Tpr2g4652 2 51790562 51793091 Tpr3g1300 3 11483037 11485107 PCT