Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1008 ATGTCATGGGTTGTAATTTCAACGGTGCTCACAGTAATTATGGTTCCATATCCTGTAACTGAAGCAAAGAAGTGTAATTTTCCAGCAATATTCAACTTCGGAGATTCAAATTCCGACACTGGTGGCCTCTCAGCAGCTTTCGGACAAGTTCCTACACCCAACGGAATCACTTTTTTTCACACTCCTGCTGGACGCTACTCCGATGGTCGTCTCATCATTGATTTCTTAGGAGGGGTGTTTAAGAAATTGTTGCCCAAAGAAGAGTATTTTTCTAAGGCTTTATACACTTTTGATATTGGCCATAATGATATCACTGCCGGCTACAATCTCGACATGACCACAGAACAAGTTAAAGCATATATACCTAATGTATTAGACCAGTTCTCGAATGTCATAAGGAGTGTATACAAGGAAGGTGGAAGGTCATTTTGGATACACAATGTAGGTCCAATTGGTTGCCTCGCATACATGTTGGATCGCTATCCGGTGAGTGCAGCTGAAACCGATAACTTCGGTTGTGCCAAACCGTTCAACGAGGTGTCCCAATACTTTAACCACAATTTGAATGAAACTATTGTGCAACTTAGGGAAGAGCTTCCAAAGGCCACAATCATATATGTTGATGTGTACACAGTGAAGTACAACCTCATTAGCCATGCCCAAAAATACGGTTTTGATGAGAATAGTGTGGTTGCATGTTGTGGAGATGGTGGAAAGTACAACTTCAATAATCATGCAAGATGTGGAGCTACAAAGATTGTGAATGGTGAAAAAATTGTGATAGCTAAATCCTGTAAAGATCCAAGTGTGAAGATTATCTGGGATGGGATTCATTTCACTGAAGCTGCTAATGAATGGATTTTTGAACAAATAGCTAATGGAGAATTTTCAGATCCACCAATCTCTTTAAAATCAACTTCTTTAAAAATAGCTTGTCGTGGCAATGTATCCAGCTATCACTATTAA 966 0.3965 MSWVVISTVLTVIMVPYPVTEAKKCNFPAIFNFGDSNSDTGGLSAAFGQVPTPNGITFFHTPAGRYSDGRLIIDFLGGVFKKLLPKEEYFSKALYTFDIGHNDITAGYNLDMTTEQVKAYIPNVLDQFSNVIRSVYKEGGRSFWIHNVGPIGCLAYMLDRYPVSAAETDNFGCAKPFNEVSQYFNHNLNETIVQLREELPKATIIYVDVYTVKYNLISHAQKYGFDENSVVACCGDGGKYNFNNHARCGATKIVNGEKIVIAKSCKDPSVKIIWDGIHFTEAANEWIFEQIANGEFSDPPISLKSTSLKIACRGNVSSYHY* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1008 321 Pfam GDSL-like Lipase/Acylhydrolase 81 291 IPR001087 GO:0016788
Tpr3g1008 321 Gene3D SGNH hydrolase 83 294 IPR036514 -
Tpr3g1008 321 Gene3D SGNH hydrolase 18 82 IPR036514 -
Tpr3g1008 321 PANTHER BNAA06G32900D PROTEIN 82 305 - -
Tpr3g1008 321 PANTHER BNAA06G32900D PROTEIN 21 77 - -
Tpr3g1008 321 SUPERFAMILY SGNH hydrolase 32 293 - -
Tpr3g1008 321 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 21 77 - -
Tpr3g1008 321 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 82 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1008 Tpr-Chr3 9226487 9229719 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1008 86 298 Acyl Lipid Metabolism Gene Families AT4G10950 28.899 4.59e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1008 - - gmx:100803899 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1008 3 9226487 9229719 Tpr3g1008 3 9226487 9229719 ECH