Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g1004 ATGTGGTGGATGATGGCGGAAAACGGTGGAAATTACTGTTCTAAGAAGAGTGATGATTTGTGTAGCAATGTTTGTGGCCAGGAATCAAGTCAAGTATCGGGCATGTCAAGAATCCGCTGCATTTTGCGCGGTTTGGATGTGAAAACCTACATATTCCTGTTTGCATTTGTTCCAATGTGCATCTTTGGAATATATATACATGGACAGAAAATCTCTTACTTTCTGCGGCCACTATGGGAAAAACCACCTAAGCCTTTCAATGTTATCCCTCATTACTATAACGACAATGTTACCATGGAGAATCTATGTAGACTTCATGGCTGGGGAGTTCGTGAGTATCCAAGGCGTGTTTATGATGCTGTGTTGTTTAGTAATGAGATTGAAATACTTACCTTGCGTTGGCAAGAATTGTACCCCTACATAACTGAATTTGTGCTCCTCGAGTCAAACTCTACATTTACTGGATTGCCTAAGCCTCTAGTTTTCAGCGGTAATAGGGACCAGTTCAAATTTGTTGAACCCCGGTTAACTTATGGGACTATTGGTGGGAGATTTAAGAAAGGAGAAAACCCGTTTGTTGAGGAAGCATATCAGCGTGTAGCATTGGATCAACTCCTTAAGATTGCTGGTATTACAGATGATGACTTGTTGATTATGTCTGATGTGGACGAGATACCAAGTGCTCACACTATTAACCTCTTGAGATGGTGCGATGAAGTACCTTCTGTCTTGCATCTACAGCTGAAGAATTATCTTTATTCGTTTGAGTTTCTTCTGGATGATAAGAGCTGGAGGGCTTCGGTTCACAGGTATCAGTCGGGAAAGACAAGATATGCACATTATCGCCAGTCTGACATTATGTTGGCAGATGCTGGTTGGCATTGTAGCTTCTGCTTCCGACGTATCAGTGATTTCATTTTTAAGATGAAAGCTTACAGCCATTATGATAGAGTTAGGTTCTCTCACTATCTAAATCCTGACAGAATTCAGAAAGTAATCTGCGAAGGGTCTGATCTATTTGACATGCTGCCTGAGGAGTACACTTTCAAGGAGATCATCGGTAAAATGGGCCCAATACCCCATTCATATTCTGCAGTTCACCTTCCTGCTTTCCTTCTAGAAAATGCAGAGAAGTATAAATTTCTCTTGCCTGGAAATTGTATGAGAGAGAGATGA 1176 0.4124 MWWMMAENGGNYCSKKSDDLCSNVCGQESSQVSGMSRIRCILRGLDVKTYIFLFAFVPMCIFGIYIHGQKISYFLRPLWEKPPKPFNVIPHYYNDNVTMENLCRLHGWGVREYPRRVYDAVLFSNEIEILTLRWQELYPYITEFVLLESNSTFTGLPKPLVFSGNRDQFKFVEPRLTYGTIGGRFKKGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSAHTINLLRWCDEVPSVLHLQLKNYLYSFEFLLDDKSWRASVHRYQSGKTRYAHYRQSDIMLADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPDRIQKVICEGSDLFDMLPEEYTFKEIIGKMGPIPHSYSAVHLPAFLLENAEKYKFLLPGNCMRER* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g1004 391 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Tpr3g1004 391 PANTHER BETA-1,4-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
Tpr3g1004 391 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 1 391 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g1004 Tpr-Chr3 9185448 9188366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g1004 1 390 Glycosyltransferase AT1G67880 79.028 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g1004 K00737 - gmx:100787062 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g1004 3 9185448 9188366 Tpr3g1004 3 9185448 9188366 ECH