Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0932 ATGGCTAACACGTTATTATATAACAACACCACGTGCGGAATCTCTTTCCATGACCAATCTCTCTCCGCCGCTAATTCCGCCTCTCGCCACGTCTCCAGATCCCTCTCTTTCTCCCAAAACTCACTTGATATGAATGCGCTAAAACACGTTATTGGGGTGGAACAGCAGAATAATAAAAGAGGGAGAGTAGTTGTTAAGTCAAAAACTCATTTTGATGATTTGGGTGTTGACATTTCATTGAGTCCACGTGTTAATGCTGTTAAGCCTTCAAGAACTGTCGCTATAACTGATCAAGCTACCGCTCTTGTTCAAGCTGGTGTTCCTGTTATTCGCTTGGCCGCTGGTGAGCCTGATTTTGATACACCTGCTGTTATTGCTGAGGCTGGGATTAATGCAATTCGTGAAGGGCACACAAGGTATACACCTAATGCTGGAACGTTAGAATTGCGCCAAGCTATTTGTCATAAGCTTAAAGAGGAGAATGGAATTGAGTATACTCCTGATCAGGTTGTTGTTAGTAACGGAGCTAAGCAGAGTATTGCTCAGGCCGTAATCGCAGTTTGCTCTCCAGGAGATGAGGTCATTGTTCCAGCTCCATTCTGGGTTAGTTACCCAGAAATGGCAAGGTTGGCTGATGCAACACCCGTAATTCTTCCAACGTCAATATCTAATAATTTCCTTTTAGATCCCAAACTCCTCGAGTCAAAAATTACTGAAAGATCAAGAGTGCTTATTCTCTGTTCACCGTCTAACCCAACAGGATCTGTCTATCCTAAAGAATTACTTGAAAAGATAGCCGAGATTGTAGCAAAGCATCCAAGGCTTCTGGTTATCTCTGATGAAATTTATGAACACATAATTTATGCACCAGCAACACACACAAGCTTTGCATCTTTACCGGGAATGTGGGACAGAACTCTAACCGTGAATGGATTTTCCAAGGCCTTTGCAATGACCGGTTGGCGACTTGGTTATATTGCTGGCCCAAAACATTTTATTGCAGCATGTGGAAAGGTCCAAAGTCAGTTCACTTCAGGGGCCAGCAGTATATCTCAGAAAGCTGCAGTTGCTGCATTAGGACTAGGCTATGCTGGTGGGGAGACTATCTCTGTCATGGTGAAAGCGTTTAGAGAACGAAGGGATTACTTGGTTAAAAGTTTTAGCGAAATTGATGGTGTTAAAATATCTGAACCAAAGGGAGCATTTTATTTATTCATCGACTTCAGCTCCTATTATGGAAGAGAAGCTGAAGGATTTGGTAAAATTGAGGATTCTGAGTCCCTCTGTCGGTATCTGTTGGATAAAGGCCAGGTAGCACTAGTGCCTGGGAGTGCATTTGGAGACGATACTTGCATCCGTATCTCTTATGCAGCATCCCTTACTACCCTACAGGCAGCTGTAGAAAGAATTAAGAAATCACTTATATCTCTTACCTCTGCTGCACTTGTTTAG 1452 0.4298 MANTLLYNNTTCGISFHDQSLSAANSASRHVSRSLSFSQNSLDMNALKHVIGVEQQNNKRGRVVVKSKTHFDDLGVDISLSPRVNAVKPSRTVAITDQATALVQAGVPVIRLAAGEPDFDTPAVIAEAGINAIREGHTRYTPNAGTLELRQAICHKLKEENGIEYTPDQVVVSNGAKQSIAQAVIAVCSPGDEVIVPAPFWVSYPEMARLADATPVILPTSISNNFLLDPKLLESKITERSRVLILCSPSNPTGSVYPKELLEKIAEIVAKHPRLLVISDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFIAACGKVQSQFTSGASSISQKAAVAALGLGYAGGETISVMVKAFRERRDYLVKSFSEIDGVKISEPKGAFYLFIDFSSYYGREAEGFGKIEDSESLCRYLLDKGQVALVPGSAFGDDTCIRISYAASLTTLQAAVERIKKSLISLTSAALV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0932 483 CDD AAT_like 110 472 - -
Tpr3g0932 483 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 27 478 - -
Tpr3g0932 483 Gene3D Aspartate Aminotransferase, domain 1 93 468 IPR015422 GO:0003824
Tpr3g0932 483 Gene3D - 139 361 IPR015421 GO:0003824
Tpr3g0932 483 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 311 324 IPR004838 GO:0003824|GO:0009058|GO:0030170
Tpr3g0932 483 Pfam Aminotransferase class I and II 108 470 IPR004839 GO:0009058|GO:0030170
Tpr3g0932 483 SUPERFAMILY PLP-dependent transferases 80 473 IPR015424 -
Tpr3g0932 483 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 27 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0932 Tpr-Chr3 8608095 8612588 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0932 K15849 - gmx:100776446 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0932 3 8608095 8612588 Tpr3g0932 3 8608095 8612588 ECH
Tpr3g0932 3 8608095 8612588 Tpr7g1060 7 10235901 10238623 PCT